RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 STMN2Q93045 179 aa15.59■□□□□ 0.09
SSB-202ENST00000409333 NXPE2Q96DL1 559 aa15.59■□□□□ 0.09
SSB-202ENST00000409333 LMF1Q96S06 567 aa15.59■□□□□ 0.09
SSB-202ENST00000409333 SDF2Q99470 211 aa15.59■□□□□ 0.09
SSB-202ENST00000409333 QRSL1Q9H0R6 528 aaKnown RBP15.59■□□□□ 0.09
SSB-202ENST00000409333 NXF5Q9H1B4 397 aaKnown RBP15.59■□□□□ 0.09
SSB-202ENST00000409333 LIN28AQ9H9Z2 209 aaKnown RBP15.59■□□□□ 0.09
SSB-202ENST00000409333 BCL2L10Q9HD36 194 aa15.59■□□□□ 0.09
SSB-202ENST00000409333 KCND3Q9UK17 655 aa15.59■□□□□ 0.09
SSB-202ENST00000409333 PCDHGB3Q9Y5G1 929 aa15.59■□□□□ 0.09
SSB-202ENST00000409333 PCDHGA6Q9Y5G7 932 aa15.59■□□□□ 0.09
SSB-202ENST00000409333 EML6Q6ZMW3 1958 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 TRBV11-1A0A0K0K1C0 115 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 A0A1W2PQ72 361 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 DHRS12A0PJE2 317 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 CDC14CA4D256 554 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 M0QX08 132 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 MASP2O00187 686 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 KCNK2O95069 426 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 ZNF682O95780 498 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 CELA2AP08217 269 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 TRHRP34981 398 aaPredicted RBP15.58■□□□□ 0.08
SSB-202ENST00000409333 PPICP45877 212 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 RFX3P48380 749 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 HPCAP84074 193 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 CHRNEQ04844 493 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 GNA13Q14344 377 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 BTBD16Q32M84 506 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 CRB2Q5IJ48 1285 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 TYW3Q6IPR3 259 aaKnown RBP15.58■□□□□ 0.08
SSB-202ENST00000409333 FRRS1Q6ZNA5 592 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 CBLL1Q75N03 491 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 ADGRG5Q8IZF4 528 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 BBS10Q8TAM1 723 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 SLCO4A1Q96BD0 722 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 IMMP1LQ96LU5 166 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 SCNM1Q9BWG6 230 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 RSPO3Q9BXY4 272 aaPredicted RBP15.58■□□□□ 0.08
SSB-202ENST00000409333 GPN2Q9H9Y4 310 aaPredicted RBP15.58■□□□□ 0.08
SSB-202ENST00000409333 Q9N2J8 555 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 MKLN1Q9UL63 735 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 WASF3Q9UPY6 502 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 ZNF451Q9Y4E5 1061 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 MED13Q9UHV7 2174 aa15.58■□□□□ 0.08
SSB-202ENST00000409333 FRG2CA6NGY1 282 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 TMEM229AB2RXF0 380 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 H0Y3Z8 333 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 PRKD3O94806 890 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 IGKV1D-16P01601 117 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 LIFP15018 202 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 CYBRD1Q53TN4 286 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 HLA-DQA1Q5Y7H0 255 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 HSDL2Q6YN16 418 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 LRRC74BQ6ZQY2 392 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 NDUFAF7Q7L592 441 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 ZAR1Q86SH2 424 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 PATL1Q86TB9 770 aaKnown RBP15.57■□□□□ 0.08
SSB-202ENST00000409333 ZNF441Q8N8Z8 693 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 LCORQ96JN0 433 aaPredicted RBP15.57■□□□□ 0.08
SSB-202ENST00000409333 COL21A1Q96P44 957 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 SEPHS2Q99611 448 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 FAM117AQ9C073 453 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 ZNF350Q9GZX5 532 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 ZNF160Q9HCG1 818 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 OLAHQ9NV23 265 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 WDR70Q9NW82 654 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 CBLCQ9ULV8 474 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 OR10H1Q9Y4A9 318 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 GPC6Q9Y625 555 aaPredicted RBP15.57■□□□□ 0.08
SSB-202ENST00000409333 DSPPQ9NZW4 1301 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 NSG1A0A0A6YYJ2 146 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 A0A0G2JPF8 293 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 TTC36A6NLP5 189 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 HNRNPCL2B2RXH8 293 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 HNRNPCL3B7ZW38 293 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 H3BNX3 289 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 HNRNPCL4P0DMR1 293 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 PSMA4P25789 261 aaKnown RBP15.57■□□□□ 0.08
SSB-202ENST00000409333 PIGAP37287 484 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 PUM1Q14671 1186 aaKnown RBP eCLIP15.57■□□□□ 0.089e-8■■□□□ 13
SSB-202ENST00000409333 PRAMEF8Q5VWM4 474 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 PRAMEF7Q5VXH5 474 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 FBXW10Q5XX13 1052 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 VTCN1Q7Z7D3 282 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 VASH2Q86V25 355 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 BCORP1Q8N888 145 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 SMYD1Q8NB12 490 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 ELP5Q8TE02 316 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 ADAMTS17Q8TE56 1095 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 THAP3Q8WTV1 239 aaPredicted RBP15.57■□□□□ 0.08
SSB-202ENST00000409333 ZG16BQ96DA0 208 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 TPD52L3Q96J77 140 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 S100A14Q9HCY8 104 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 CALML5Q9NZT1 146 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 ANAPC2Q9UJX6 822 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 SAMD4AQ9UPU9 718 aaKnown RBP15.57■□□□□ 0.08
SSB-202ENST00000409333 AURKCQ9UQB9 309 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 WDR45Q9Y484 360 aa15.57■□□□□ 0.08
SSB-202ENST00000409333 NPIPA5A0A0B4J1W7 369 aa15.56■□□□□ 0.08
SSB-202ENST00000409333 NPIPA7E9PJI5 369 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms