RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 ANKRD33BA6NCL7 494 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 G3V3Y1 287 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 KRT16P08779 473 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 ALOX5P09917 674 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 PIGAP37287 484 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 PNLIPRP2P54317 469 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 FOXK1P85037 733 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 EFR3AQ14156 821 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 DUSP5Q16690 384 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 DECR1Q16698 335 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 TBCELQ5QJ74 424 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 BLOC1S3Q6QNY0 202 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 GK5Q6ZS86 529 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 PIK3R3Q92569 461 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 NR4A3Q92570 626 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 JADE3Q92613 823 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 ADOQ96SZ5 270 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 STACQ99469 402 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 YIPF4Q9BSR8 244 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 INPP5KQ9BT40 448 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 RMND5AQ9H871 391 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 PROK2Q9HC23 129 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 SERHLQ9NQF3 203 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 DUSP22Q9NRW4 184 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 GIN1Q9NXP7 522 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 CCDC167Q9P0B6 97 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 MRTO4Q9UKD2 239 aaKnown RBP18.64■□□□□ 0.57
PTCD3-202ENST00000409326 FAF1Q9UNN5 650 aaPredicted RBP18.64■□□□□ 0.57
PTCD3-202ENST00000409326 NCKAP5O14513 1909 aa18.64■□□□□ 0.57
PTCD3-202ENST00000409326 GXYLT2A0PJZ3 443 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 PINLYPA6NC86 204 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 KCNH1O95259 989 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 CDKN2CP42773 168 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 DNASE1L1P49184 302 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 GYS2P54840 703 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 KCNK10P57789 538 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 MRPS22P82650 360 aaKnown RBP18.63■□□□□ 0.57
PTCD3-202ENST00000409326 DESI1Q6ICB0 168 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 C6orf120Q7Z4R8 191 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 CLEC4FQ8N1N0 589 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 TRIML2Q8N7C3 387 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 VPS33AQ96AX1 596 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 EFHD2Q96C19 240 aaPredicted RBP18.63■□□□□ 0.57
PTCD3-202ENST00000409326 TMCO6Q96DC7 493 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 RMND5BQ96G75 393 aaPredicted RBP18.63■□□□□ 0.57
PTCD3-202ENST00000409326 SLC35G5Q96KT7 338 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 NODALQ96S42 347 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 SLX1AQ9BQ83 275 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 PIGUQ9H490 435 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 VPS4AQ9UN37 437 aa18.63■□□□□ 0.57
PTCD3-202ENST00000409326 CCDC154A6NI56 674 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 RFXANKO14593 260 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 SOX30O94993 753 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 IL33O95760 270 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 ZNF24P17028 368 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 LSP1P33241 339 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 CASP3P42574 277 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 MAN2A2P49641 1150 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 PSMD4P55036 377 aaKnown RBP18.62■□□□□ 0.57
PTCD3-202ENST00000409326 KCNJ2P63252 427 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 ALDH6A1Q02252 535 aaKnown RBP18.62■□□□□ 0.57
PTCD3-202ENST00000409326 SF3A3Q12874 501 aaKnown RBP eCLIP18.62■□□□□ 0.57
PTCD3-202ENST00000409326 AGKQ53H12 422 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 SAXO2Q658L1 398 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 BICRALQ6AI39 1079 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 COX18Q8N8Q8 333 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 ADAMTS15Q8TE58 950 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 C10orf82Q8WW14 230 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 SPDL1Q96EA4 605 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 NEURL3Q96EH8 262 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 OTUB1Q96FW1 271 aaPredicted RBP18.62■□□□□ 0.57
PTCD3-202ENST00000409326 ITCHQ96J02 903 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 SLC35A5Q9BS91 424 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 DOHHQ9BU89 302 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 ANGPTL4Q9BY76 406 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 METTL7AQ9H8H3 244 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 FREM3P0C091 2139 aa18.62■□□□□ 0.57
PTCD3-202ENST00000409326 NR5A2O00482 541 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 CYP4B1P13584 511 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 EDN3P14138 238 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 MATN1P21941 496 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 MST1P26927 711 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 RFC3P40938 356 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 TDGF1P3P51864 188 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 FOXO1Q12778 655 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 SNTA1Q13424 505 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 IGFBP7Q16270 282 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 RNFT1Q5M7Z0 435 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 GALNT11Q8NCW6 608 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 FAM110BQ8TC76 370 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 MIPOL1Q8TD10 442 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 RNF138Q8WVD3 245 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 CDS1Q92903 461 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 NTNG2Q96CW9 530 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 OR7D2Q96RA2 312 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 BTBD2Q9BX70 525 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 TTTY12Q9BZ98 90 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 SERHL2Q9H4I8 314 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 IL1RL2Q9HB29 575 aa18.61■□□□□ 0.57
PTCD3-202ENST00000409326 SLC52A3Q9NQ40 469 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms