RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 KRT20P35900 424 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 MRPS35P82673 323 aaKnown RBP14.95□□□□□ -0.02
CHMP3-203ENST00000409225 SRSF2Q01130 221 aaKnown RBP14.95□□□□□ -0.02
CHMP3-203ENST00000409225 DUSP2Q05923 314 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 EFR3AQ14156 821 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 SLMAPQ14BN4 828 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 ZKSCAN8Q15776 578 aaPredicted RBP14.95□□□□□ -0.02
CHMP3-203ENST00000409225 SGCBQ16585 318 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 CCNYL2Q5T2Q4 361 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 FAM180BQ6P0A1 224 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 SLC48A1Q6P1K1 146 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 OR6K3Q8NGY3 331 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 SMAP2Q8WU79 429 aaPredicted RBP14.95□□□□□ -0.02
CHMP3-203ENST00000409225 NEUROG1Q92886 237 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 SERPINI1Q99574 410 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 RBBP8Q99708 897 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 TACO1Q9BSH4 297 aaKnown RBP14.95□□□□□ -0.02
CHMP3-203ENST00000409225 LRRC1Q9BTT6 524 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 NTMT1Q9BV86 223 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 BEX2Q9BXY8 128 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 STMN4Q9H169 189 aaPredicted RBP14.95□□□□□ -0.02
CHMP3-203ENST00000409225 PLSCR4Q9NRQ2 329 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 GDF2Q9UK05 429 aaPredicted RBP14.95□□□□□ -0.02
CHMP3-203ENST00000409225 RNF115Q9Y4L5 304 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 PCDHA9Q9Y5H5 950 aa14.95□□□□□ -0.02
CHMP3-203ENST00000409225 TSPAN2O60636 221 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 SEMA3DO95025 777 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 PLGP00747 810 aaPredicted RBP14.94□□□□□ -0.02
CHMP3-203ENST00000409225 FCGR2AP12318 317 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 CSNK2A2P19784 350 aaPredicted RBP14.94□□□□□ -0.02
CHMP3-203ENST00000409225 CTBP2P56545 445 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 CORO7P57737 925 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 RPS3AP61247 264 aaKnown RBP14.94□□□□□ -0.02
CHMP3-203ENST00000409225 ZNF844Q08AG5 666 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 CTU2Q2VPK5 515 aaKnown RBP14.94□□□□□ -0.02
CHMP3-203ENST00000409225 ADAM5Q6NVV9 412 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 DNM1P46Q6ZS02 220 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 RAPH1Q70E73 1250 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 FADS6Q8N9I5 356 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 OR2M3Q8NG83 312 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 GFM2Q969S9 779 aaKnown RBP14.94□□□□□ -0.02
CHMP3-203ENST00000409225 EFHD2Q96C19 240 aaPredicted RBP14.94□□□□□ -0.02
CHMP3-203ENST00000409225 KLHL29Q96CT2 875 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 HS6ST2Q96MM7 605 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 OSBPL9Q96SU4 736 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 KCNK17Q96T54 332 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 MRPL1Q9BYD6 325 aaKnown RBP14.94□□□□□ -0.02
CHMP3-203ENST00000409225 PRRG4Q9BZD6 226 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 ANKRA2Q9H9E1 313 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 NMRAL1Q9HBL8 299 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 MED11Q9P086 117 aa14.94□□□□□ -0.02
CHMP3-203ENST00000409225 A0A1W2PP18 115 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 C1orf226A1L170 272 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 OR2M5A3KFT3 312 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 MTHFD2P13995 350 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 ARL1P40616 181 aaPredicted RBP14.93□□□□□ -0.02
CHMP3-203ENST00000409225 SLC6A8P48029 635 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 MAPK12P53778 367 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 STX5Q13190 355 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 PAGE2Q7Z2X7 111 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 GOLGA7Q7Z5G4 137 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 CMC1Q7Z7K0 106 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 ZBED8Q8IZ13 594 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 METTL25Q8N6Q8 603 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 RNF138Q8WVD3 245 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 BTBD9Q96Q07 612 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 CPNE1Q99829 537 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 IPPKQ9H8X2 491 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 FANCFQ9NPI8 374 aa14.93□□□□□ -0.02
CHMP3-203ENST00000409225 IGHV4-30-2A0A087WSY4 118 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 UGDHO60701 494 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 CD3EP07766 207 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 CT45A8P0DMV1 189 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 CT45A9P0DMV2 189 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 GFAPP14136 432 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 GTF2H2Q13888 395 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 PFKFB4Q16877 469 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 CT45A2Q5DJT8 189 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 GTF2H2CQ6P1K8 395 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 NPSR1Q6W5P4 371 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 BEND4Q6ZU67 534 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 TBC1D1Q86TI0 1168 aaPredicted RBP14.92□□□□□ -0.02
CHMP3-203ENST00000409225 L3MBTL4Q8NA19 623 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 CDKL2Q92772 493 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 GMPPAQ96IJ6 420 aaPredicted RBP14.92□□□□□ -0.02
CHMP3-203ENST00000409225 CDK15Q96Q40 435 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 RHNO1Q9BSD3 238 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 FOLH1BQ9HBA9 442 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 PFDN4Q9NQP4 134 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 AHSPQ9NZD4 102 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 ADAM29Q9UKF5 820 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 GPR52Q9Y2T5 361 aa14.92□□□□□ -0.02
CHMP3-203ENST00000409225 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.92□□□□□ -0.024e-7■■■■□ 26.6
CHMP3-203ENST00000409225 SYCE1LA8MT33 242 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 E7ESA3 106 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 LINC01387J3KSC0 135 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 WIPF1O43516 503 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 SSX4O60224 188 aa14.91□□□□□ -0.02
CHMP3-203ENST00000409225 SS18L1O75177 396 aaPredicted RBP14.91□□□□□ -0.02
CHMP3-203ENST00000409225 GUCY1B2O75343 617 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms