RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 DUSP26Q9BV47 211 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 OSBPL11Q9BXB4 747 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 QPCTLQ9NXS2 382 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 MAPRE3Q9UPY8 281 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 ZNF407Q9C0G0 2248 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 TRGV5A0A0B4J1U4 118 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 A1L4Q6 167 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 C2orf72A6NCS6 295 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 PRAMEF25A6NGN4 478 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 TTC36A6NLP5 189 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 TRPC5OSA6NMA1 111 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 NPIPA2E9PIF3 369 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 NPIPA3F8WFD2 350 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 SLCO1B7G3V0H7 640 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 GNB5O14775 395 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 KLF11O14901 512 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 SUSD5O60279 629 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 GABRA3P34903 492 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 MAN2A2P49641 1150 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 C21orf58P58505 322 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 VPS26BQ4G0F5 336 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 FNDC7Q5VTL7 733 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 C3P1Q6ZMU1 363 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 CD163Q86VB7 1156 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 OR1J4Q8NGS1 313 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 CCDC120Q96HB5 630 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 DPY30Q9C005 99 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 BHLHE41Q9C0J9 482 aaPredicted RBP16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 GALNT9Q9HCQ5 603 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 NTMQ9P121 344 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 MRTO4Q9UKD2 239 aaKnown RBP16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 SNX8Q9Y5X2 465 aa16.42■□□□□ 0.22
PDLIM2-206ENST00000409141 ICE1Q9Y2F5 2266 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 UTP20O75691 2785 aaKnown RBP16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 GOLGA8QA0A0J9YX86 632 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 A0A1B0GVC2 190 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 GOLGA8OA6NCC3 632 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 HMGB1P1B2RPK0 211 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 GOLGA8NF8WBI6 632 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 SDHDO14521 159 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 CFLARO15519 480 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 HCN1O60741 890 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 TRAPPC6AO75865 159 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 EPHA3P29320 983 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 PTGDSP41222 190 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 PRR5P85299 388 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 TIGD3Q6B0B8 471 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 ANGPTL8Q6UXH0 198 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 CDRT4Q8N9R6 151 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 GPR151Q8TDV0 419 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 SLC9A6Q92581 669 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 NTNG2Q96CW9 530 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 MS4A4EQ96PG1 132 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 PHF12Q96QT6 1004 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 WDR55Q9H6Y2 383 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 ACKR4Q9NPB9 350 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 PLEKHB1Q9UF11 243 aaPredicted RBP16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 MEMO1Q9Y316 297 aa16.41■□□□□ 0.22
PDLIM2-206ENST00000409141 DNAJC13O75165 2243 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 AQP7O14520 342 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 C6orf47O95873 294 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 CYP4B1P13584 511 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 ELAVL4P26378 380 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 RFX3P48380 749 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 TRPC1P48995 793 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 PSMD4P55036 377 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 TOMM20Q15388 145 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 SPDYE7PQ495Y7 208 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 GXYLT1Q4G148 440 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 OGFOD2Q6N063 350 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 CAMKMTQ7Z624 323 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 EID3Q8N140 333 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 PIK3R3Q92569 461 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 FAM120BQ96EK7 910 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 GIMAP5Q96F15 307 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 SIRT3Q9NTG7 399 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 ZCCHC3Q9NUD5 404 aaKnown RBP16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 TNFRSF10DQ9UBN6 386 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 ACAD8Q9UKU7 415 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 C15orf41Q9Y2V0 281 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 EXPH5Q8NEV8 1989 aa16.4■□□□□ 0.22
PDLIM2-206ENST00000409141 GXYLT2A0PJZ3 443 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 OR14I1A6ND48 311 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 E9PLN8 166 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 KCNH1O95259 989 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 GP1BBP13224 206 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 MAP3K8P41279 467 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 CCT3P49368 545 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 NXNQ6DKJ4 435 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 OR4F3Q6IEY1 312 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 MFSD12Q6NUT3 480 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 SPATA19Q7Z5L4 167 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 OR5M9Q8NGP3 310 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 PSMA8Q8TAA3 256 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 NEIL3Q8TAT5 605 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 FBXO30Q8TB52 745 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 PIWIL2Q8TC59 973 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 LRRC8CQ8TDW0 803 aa16.39■□□□□ 0.21
PDLIM2-206ENST00000409141 SARAFQ96BY9 339 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms