RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 EOGTQ5NDL2 527 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 ACSM5Q6NUN0 579 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 PGBD2Q6P3X8 592 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 LRRN1Q6UXK5 716 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 CMIPQ8IY22 773 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 MICALL2Q8IY33 904 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 ZNF485Q8NCK3 441 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 THAP4Q8WY91 577 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 MRPS31Q92665 395 aaKnown RBP12.05□□□□□ -0.48
HERC3-203ENST00000407637 LCORQ96JN0 433 aaPredicted RBP12.05□□□□□ -0.48
HERC3-203ENST00000407637 FUZQ9BT04 418 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 PDCD10Q9BUL8 212 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 TMPRSS13Q9BYE2 586 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 R3HDMLQ9H3Y0 253 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 FGF20Q9NP95 211 aaPredicted RBP12.05□□□□□ -0.48
HERC3-203ENST00000407637 EXOSC1Q9Y3B2 195 aaKnown RBP12.05□□□□□ -0.48
HERC3-203ENST00000407637 EFCAB7A8K855 629 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 WNT10BO00744 389 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 SCAMP2O15127 329 aaKnown RBP12.05□□□□□ -0.48
HERC3-203ENST00000407637 PRAMEF2O60811 474 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 CRYBA1P05813 215 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 RHOQP17081 205 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 HSD17B2P37059 387 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 RGRP47804 291 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 PSMA6P60900 246 aaKnown RBP12.05□□□□□ -0.48
HERC3-203ENST00000407637 CDK6Q00534 326 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 GINS1Q14691 196 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 TMEM17Q86X19 198 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 HMGB4Q8WW32 186 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 FUBP3Q96I24 572 aaKnown RBP eCLIP12.05□□□□□ -0.48
HERC3-203ENST00000407637 AUNIPQ9H7T9 357 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 C14orf105Q9NVL8 296 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 TMEM248Q9NWD8 314 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 ST3GAL5Q9UNP4 418 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 PLEKHM1Q9Y4G2 1056 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 PTCH2Q9Y6C5 1203 aa12.05□□□□□ -0.48
HERC3-203ENST00000407637 OR2M5A3KFT3 312 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 LRRC72A6NJI9 287 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 ARHGEF33A8MVX0 844 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 ARPC1BO15143 372 aaKnown RBP12.04□□□□□ -0.48
HERC3-203ENST00000407637 GREM1O60565 184 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 RAMP2O60895 175 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 LGALS2P05162 132 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 RORAP35398 523 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 SLC1A3P43003 542 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 PTGFRP43088 359 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 MTNR1AP48039 350 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 FNTBP49356 437 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 RAP2BP61225 183 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 SNRPEP62304 92 aaKnown RBP12.04□□□□□ -0.48
HERC3-203ENST00000407637 ZNF155Q12901 538 aaPredicted RBP12.04□□□□□ -0.48
HERC3-203ENST00000407637 KLF9Q13886 244 aaPredicted RBP12.04□□□□□ -0.48
HERC3-203ENST00000407637 GUCA2BQ16661 112 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 TMEM255AQ5JRV8 349 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 DCST1Q5T197 706 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 FAM27D1Q5T7N8 215 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 CPTPQ5TA50 214 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 SLC6A19Q695T7 634 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 ESPNLQ6ZVH7 1005 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 TECPR1Q7Z6L1 1165 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 C12orf40Q86WS4 652 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 OXR1Q8N573 874 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 OR14A16Q8NHC5 309 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 GNPDA2Q8TDQ7 276 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 BOCQ9BWV1 1114 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 MED11Q9P086 117 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 PTGFRNQ9P2B2 879 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 MAP4K5Q9Y4K4 846 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 SCN8AQ9UQD0 1980 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 SLC9B1P1A6NJY1 282 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 KPNA3O00505 521 aaPredicted RBP12.04□□□□□ -0.48
HERC3-203ENST00000407637 SERPINA3P01011 423 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 DDX39BQ13838 428 aaKnown RBP12.04□□□□□ -0.48
HERC3-203ENST00000407637 BOP1Q14137 746 aaKnown RBP12.04□□□□□ -0.48
HERC3-203ENST00000407637 TSPAN33Q86UF1 283 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 SERPINA12Q8IW75 414 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 ZNF683Q8IZ20 524 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 HDDC3Q8N4P3 179 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 CLDN19Q8N6F1 224 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 OR4F15Q8NGB8 312 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 OR5AK3PQ8NH89 298 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 IGSF8Q969P0 613 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 PEX11GQ96HA9 241 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 PAPOLGQ9BWT3 736 aaKnown RBP12.04□□□□□ -0.48
HERC3-203ENST00000407637 ANKRD19PQ9H560 264 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 MROH8Q9H579 483 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 PIM2Q9P1W9 311 aa12.04□□□□□ -0.48
HERC3-203ENST00000407637 AFF4Q9UHB7 1163 aaKnown RBP12.04□□□□□ -0.48
HERC3-203ENST00000407637 PRMT3O60678 531 aa12.03□□□□□ -0.48
HERC3-203ENST00000407637 EFCAB14O75071 495 aa12.03□□□□□ -0.48
HERC3-203ENST00000407637 AKR7A3O95154 331 aa12.03□□□□□ -0.48
HERC3-203ENST00000407637 IGHV2-70P01814 119 aa12.03□□□□□ -0.48
HERC3-203ENST00000407637 SHC1P29353 583 aa12.03□□□□□ -0.48
HERC3-203ENST00000407637 MTNR1BP49286 362 aa12.03□□□□□ -0.48
HERC3-203ENST00000407637 OC90Q02509 493 aaPredicted RBP12.03□□□□□ -0.48
HERC3-203ENST00000407637 SERINC3Q13530 473 aa12.03□□□□□ -0.48
HERC3-203ENST00000407637 ZNF124Q15973 351 aa12.03□□□□□ -0.48
HERC3-203ENST00000407637 SYTL3Q4VX76 610 aa12.03□□□□□ -0.48
HERC3-203ENST00000407637 HES5Q5TA89 166 aa12.03□□□□□ -0.48
HERC3-203ENST00000407637 PRAMEF13Q5VWM6 474 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms