RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 FAM46AQ96IP4 442 aaKnown RBP11.28□□□□□ -0.6
HMGB1-206ENST00000405805 FAIM2Q9BWQ8 316 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 OR51I1Q9H343 314 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 RDH14Q9HBH5 336 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 ZNF69Q9UC07 566 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 BTNL2Q9UIR0 455 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 ZNF860A6NHJ4 632 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 J3QLW9 94 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 RFXAPO00287 272 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 EEF1E1O43324 174 aaKnown RBP11.28□□□□□ -0.6
HMGB1-206ENST00000405805 CCL5P13501 91 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 ZNF19P17023 458 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 PTPN6P29350 595 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 B4GALNT1Q00973 533 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 LRRC32Q14392 662 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 FAM26DQ5JW98 314 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 CNIH2Q6PI25 160 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 METTL3Q86U44 580 aaKnown RBP11.28□□□□□ -0.6
HMGB1-206ENST00000405805 PDZD3Q86UT5 571 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 OR52L1Q8NGH7 329 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 OR8K5Q8NH50 307 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 SLC7A6Q92536 515 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 UFSP2Q9NUQ7 469 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 IRAK3Q9Y616 596 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 SLC31A1O15431 190 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 PRAMEF4O60810 478 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 ZNF780AO75290 641 aaPredicted RBP11.28□□□□□ -0.6
HMGB1-206ENST00000405805 SPDEFO95238 335 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 CD160O95971 181 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 ZNF8P17098 575 aaPredicted RBP11.28□□□□□ -0.6
HMGB1-206ENST00000405805 CD22P20273 847 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 RPL4P36578 427 aaKnown RBP11.28□□□□□ -0.6
HMGB1-206ENST00000405805 TGM3Q08188 693 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 BATFQ16520 125 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 PRAMEF9Q5VWM5 478 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 PDZD9Q8IXQ8 264 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 THAP6Q8TBB0 222 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 SAMD11Q96NU1 681 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 C11orf54Q9H0W9 315 aaPredicted RBP11.28□□□□□ -0.6
HMGB1-206ENST00000405805 POT1Q9NUX5 634 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 ZNF226Q9NYT6 803 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 STUB1Q9UNE7 303 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
HMGB1-206ENST00000405805 BRWD1Q9NSI6 2320 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 ZNF638Q14966 1978 aaKnown RBP11.28□□□□□ -0.6
HMGB1-206ENST00000405805 DAPL1A0PJW8 107 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 OR6C65A6NJZ3 312 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 GPR37L1O60883 481 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 IGLV3-27P01718 113 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 F11P03951 625 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 OSMP13725 252 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 LRRC37A5PQ49AS3 106 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 BRAT1Q6PJG6 821 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 OR51A7Q8NH64 312 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 GRHL3Q8TE85 626 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 TCEAL4Q96EI5 215 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 ANKHQ9HCJ1 492 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 P2RX2Q9UBL9 471 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 COPS3Q9UNS2 423 aa11.28□□□□□ -0.6
HMGB1-206ENST00000405805 MGAMO43451 1857 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 ZNF234Q14588 700 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 GPR19Q15760 415 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 DUSP6Q16828 381 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 ODF4Q2M2E3 257 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 ZNF750Q32MQ0 723 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 SLC8B1Q6J4K2 584 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 POMZP3Q6PJE2 187 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 DNAJC5GQ8N7S2 189 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 OR52P1PQ8NH57 321 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 SLC38A5Q8WUX1 472 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 ZSWIM3Q96MP5 696 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 SPATA5L1Q9BVQ7 753 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 CXorf36Q9H7Y0 433 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 TNFRSF10DQ9UBN6 386 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 OSGIN1Q9UJX0 560 aa11.27□□□□□ -0.6
HMGB1-206ENST00000405805 PIKFYVEQ9Y2I7 2098 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 DSCR3O14972 297 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 FGF18O76093 207 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 SIX6O95475 246 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 CD6P30203 668 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 HTR3AP46098 478 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 MC2RQ01718 297 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 EIF4EBP2Q13542 120 aaPredicted RBP11.27□□□□□ -0.61
HMGB1-206ENST00000405805 KLHL22Q53GT1 634 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 FAM46CQ5VWP2 391 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 GRHL2Q6ISB3 625 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 TMEM88Q6PEY1 159 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 TMEM107Q6UX40 140 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 PARGQ86W56 976 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 ZNF615Q8N8J6 731 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 CYB561A3Q8NBI2 242 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 PIGXQ8TBF5 258 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 IFT27Q9BW83 186 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 CPNE7Q9UBL6 633 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 IL36AQ9UHA7 158 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 CCL27Q9Y4X3 112 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 LOC105371267A0A1B0GV96 52 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 POM121BA6NF01 834 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 RAB36O95755 333 aa11.27□□□□□ -0.61
HMGB1-206ENST00000405805 KIAA1024LP59773 190 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms