RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 HIDE1A8MVS5 230 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 H7C0S8 307 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 L7N2F9 121 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 SGK494L7N484 410 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 PRMT3O60678 531 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 NTN1O95631 604 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 H2AFB2P0C5Z0 115 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 OC90Q02509 493 aaPredicted RBP16.07■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF273Q14593 569 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 CCSMST1Q4G0I0 132 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 PLPP4Q5VZY2 271 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 TPGS2Q68CL5 300 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 TCTN3Q6NUS6 607 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 ANKRD33Q7Z3H0 272 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 SIAH3Q8IW03 269 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF687Q8N1G0 1237 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 C2orf73Q8N5S3 287 aaPredicted RBP16.07■□□□□ 0.16
PTPRA-205ENST00000399903 BMPERQ8N8U9 685 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 GPR26Q8NDV2 337 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 OR52H1Q8NGJ2 320 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 SPRYD4Q8WW59 207 aaPredicted RBP16.07■□□□□ 0.16
PTPRA-205ENST00000399903 SLC5A11Q8WWX8 675 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 ALG14Q96F25 216 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 ABHD1Q96SE0 405 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 SLC46A2Q9BY10 475 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 BET1O15155 118 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 SIX6O95475 246 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 CXCL14O95715 111 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 GNRH1P01148 92 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 HLA-DQB1P01920 261 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 KLK1P06870 262 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 SHC1P29353 583 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 RAE1P78406 368 aaKnown RBP16.07■□□□□ 0.16
PTPRA-205ENST00000399903 HSPB3Q12988 150 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 PODNL1Q6PEZ8 512 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 PRSS45Q7RTY3 260 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 TMEM25Q86YD3 366 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 BOLLQ8N9W6 283 aaKnown RBP16.07■□□□□ 0.16
PTPRA-205ENST00000399903 L3MBTL4Q8NA19 623 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 TTLQ8NG68 377 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 PLA2G12AQ9BZM1 189 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 ZDHHC6Q9H6R6 413 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 DLL4Q9NR61 685 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 PCDHB16Q9NRJ7 776 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 CUEDC1Q9NWM3 386 aaPredicted RBP16.07■□□□□ 0.16
PTPRA-205ENST00000399903 TRPC4Q9UBN4 977 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 HPXP02790 462 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 ACSL1P33121 698 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 BTG1P62324 171 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF770Q6IQ21 691 aaPredicted RBP16.07■□□□□ 0.16
PTPRA-205ENST00000399903 C3P1Q6ZMU1 363 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 OR4K5Q8NGD3 323 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 WDR48Q8TAF3 677 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 GCDHQ92947 438 aaPredicted RBP16.07■□□□□ 0.16
PTPRA-205ENST00000399903 TTTY10Q9BZA0 68 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 BRD9Q9H8M2 597 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 RDH14Q9HBH5 336 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 MRPL39Q9NYK5 338 aaKnown RBP16.07■□□□□ 0.16
PTPRA-205ENST00000399903 KCMF1Q9P0J7 381 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 PFDN2Q9UHV9 154 aa16.07■□□□□ 0.16
PTPRA-205ENST00000399903 SF3B6Q9Y3B4 125 aaKnown RBP16.07■□□□□ 0.16
PTPRA-205ENST00000399903 NPIPB15A6NHN6 443 aaPredicted RBP16.06■□□□□ 0.16
PTPRA-205ENST00000399903 NEDD8-MDP1E9PL57 170 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 MMP20O60882 483 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 CDH11P55287 796 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF630Q2M218 657 aaPredicted RBP16.06■□□□□ 0.16
PTPRA-205ENST00000399903 TCTE1Q5JU00 501 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 ARL9Q6T311 187 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 LINC00518Q8N0U6 118 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 LILRB1Q8NHL6 650 aaPredicted RBP16.06■□□□□ 0.16
PTPRA-205ENST00000399903 TMEM19Q96HH6 336 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF416Q9BWM5 594 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 OR10A4Q9H209 315 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 OSGEPL1Q9H4B0 414 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 RC3H2Q9HBD1 1191 aaKnown RBP16.06■□□□□ 0.16
PTPRA-205ENST00000399903 FZD3Q9NPG1 666 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 CNIH4Q9P003 139 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 FBXW2Q9UKT8 454 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 KHNYNO15037 678 aaKnown RBP16.06■□□□□ 0.16
PTPRA-205ENST00000399903 SEMA7AO75326 666 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 SRPRAP08240 638 aaKnown RBP16.06■□□□□ 0.16
PTPRA-205ENST00000399903 SPAM1P38567 509 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 NSG1P42857 185 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 PITPNBP48739 271 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 PFN3P60673 137 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF33BQ06732 778 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 REEP3Q6NUK4 255 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 ZNF613Q6PF04 617 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 ATRAIDQ6UW56 229 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 SYT9Q86SS6 491 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 XAGE5Q8WWM1 108 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 ING5Q8WYH8 240 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 HSD17B8Q92506 261 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 SPATA6Q9NWH7 488 aaPredicted RBP16.06■□□□□ 0.16
PTPRA-205ENST00000399903 PHF11Q9UIL8 331 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 ANAPC1Q9H1A4 1944 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 SLC28A2O43868 658 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 CLTBP09497 229 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 LIMS3P0CW19 117 aa16.06■□□□□ 0.16
PTPRA-205ENST00000399903 LIMS4P0CW20 117 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms