RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 AMHR2Q16671 573 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 OTUD1Q5VV17 481 aaPredicted RBP8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 ANKRD13BQ86YJ7 626 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 C14orf79Q96F83 325 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 PGLYRP2Q96PD5 576 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 CRAMP1Q96RY5 1269 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 GSX1Q9H4S2 264 aaPredicted RBP8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 C12orf10Q9HB07 376 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 IL21RQ9HBE5 538 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 NGBQ9NPG2 151 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 TMEM72A0PK05 275 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 TPRG1Q6ZUI0 275 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 OR51L1Q8NGJ5 315 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 ARNTL2Q8WYA1 636 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 ZUFSPQ96AP4 578 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 PRDM12Q9H4Q4 367 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 TBX22Q9Y458 520 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 EPHB6O15197 1021 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 TNFSF12O43508 249 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 OR1F1O43749 312 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 SORBS2O94875 1100 aaKnown RBP8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 TXNDC12O95881 172 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 LIPCP11150 499 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 TYRP14679 529 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 KCNJ3P48549 501 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 ARRB1P49407 418 aaPredicted RBP8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 DLX5P56178 289 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 MLF1P58340 268 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 PPATQ06203 517 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 HNRNPDQ14103 355 aaKnown RBP8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 TMEM225Q6GV28 225 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 MBOAT1Q6ZNC8 495 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 TRABD2AQ86V40 505 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 LNX1Q8TBB1 728 aaPredicted RBP8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 PRRC1Q96M27 445 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 ARHGAP39Q9C0H5 1083 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 ACOT13Q9NPJ3 140 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 RIC1Q4ADV7 1423 aa8.21□□□□□ -1.1
CACNA1C-220ENST00000399655 SALL1Q9NSC2 1324 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 PSMB4P28070 264 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 RPS19P39019 145 aaKnown RBP8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 BPIFB3P59826 476 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 GABARAPL2P60520 117 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 Q6ZRG5 221 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 UROC1Q96N76 676 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 SERPINA5P05154 406 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 COX6CP09669 75 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 HMGCS2P54868 508 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 FNDC8Q8TC99 324 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 SAMD8Q96LT4 415 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 MROH2BQ7Z745 1585 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 FER1L5A0AVI2 2057 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 M0QZ24 198 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 MAN2B1O00754 1011 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 NELFEP18615 380 aaKnown RBP8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 NTF3P20783 257 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 HLA-FP30511 346 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 FBXO31Q5XUX0 539 aaPredicted RBP8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 OR1S2Q8NGQ3 325 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 S1PR3Q99500 378 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 TKTL2Q9H0I9 626 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 SLC6A14Q9UN76 642 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 A0A087WWV3 80 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 GPR37L1O60883 481 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 PRNPP04156 253 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 PRSS3P35030 304 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 EPHA5P54756 1037 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 ERVPABLB-1P60509 514 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 SORDQ00796 357 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 UNC50Q53HI1 259 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 ADGRD1Q6QNK2 874 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 B3GNT9Q6UX72 402 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 TMEM150AQ86TG1 271 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 HEATR5AQ86XA9 2040 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 PDLIM2Q96JY6 352 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 CRB3Q9BUF7 120 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 TUBE1Q9UJT0 475 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 TMEM235A6NFC5 223 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 TSPAN3O60637 253 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 PEX2P28328 305 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 TACR3P29371 465 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 BTN1A1Q13410 526 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 DUSP6Q16828 381 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 LRRC38Q5VT99 294 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 TMEM244Q5VVB8 128 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 MOXD1Q6UVY6 613 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 UNC5AQ6ZN44 842 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 FAM43BQ6ZT52 329 aaPredicted RBP8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 SGMS1Q86VZ5 419 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 KLBQ86Z14 1044 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 C10orf126Q8N4M7 172 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 CELF6Q96J87 481 aaKnown RBP8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 WWTR1Q9GZV5 400 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 FAM206AQ9NX38 181 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 YARS2Q9Y2Z4 477 aaKnown RBP8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 PLLPQ9Y342 182 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 DNMBPQ6XZF7 1577 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 APODP05090 189 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 RTP1P59025 263 aa8.2□□□□□ -1.1
CACNA1C-220ENST00000399655 RAB1AP62820 205 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms