RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 URODP06132 367 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 DRD2P14416 443 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 TGM4P49221 684 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 BLOC1S1P78537 153 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 S100A12P80511 92 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 ZXDBP98169 803 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 ACSM1Q08AH1 577 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 GAS6Q14393 721 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 AAK1Q2M2I8 961 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 DLK2Q6UY11 383 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 MBOAT1Q6ZNC8 495 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 Q6ZPB1 254 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 SHFQ7M4L6 423 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 LHFPL3Q86UP9 236 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 NKD1Q969G9 470 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 CIDECQ96AQ7 238 aaPredicted RBP5.16□□□□□ -1.58
PTPRD-205ENST00000397611 HSPA12BQ96MM6 686 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 OR51J1Q9H342 316 aa5.16□□□□□ -1.58
PTPRD-205ENST00000397611 F5H0A9 414 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 APOC1P02654 83 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 CKMP06732 381 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 GZMKP49863 264 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 CDKN1CP49918 316 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 WDR5P61964 334 aaKnown RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 MLLT1Q03111 559 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 GINS1Q14691 196 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 LARS2Q15031 903 aaKnown RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 DPPA4Q7L190 304 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 GDPD3Q7L5L3 318 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 CASTOR1Q8WTX7 329 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 UBL7Q96S82 380 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 S100A13Q99584 98 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF436Q9C0F3 470 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 QRSL1Q9H0R6 528 aaKnown RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 TMEM168Q9H0V1 697 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 C11orf54Q9H0W9 315 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 NDUFB11Q9NX14 153 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 PCDHGB7Q9Y5F8 929 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 INSL5Q9Y5Q6 135 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 DSCR3O14972 297 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 POLR1CO15160 346 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 PIP5K1CO60331 668 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 TBL1XO60907 577 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 SLC22A5O76082 557 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 VIPR1P32241 457 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 GRK5P34947 590 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 TPMTP51580 245 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 PFN3P60673 137 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF91Q05481 1191 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 ZXDCQ2QGD7 858 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 TSPAN33Q86UF1 283 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 LAX1Q8IWV1 398 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 GLYATL1Q969I3 302 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 ERVMER34-1Q9H9K5 563 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF304Q9HCX3 659 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 WASH6PQ9NQA3 447 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 RBFOX1Q9NWB1 397 aaKnown RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 PDCD11Q14690 1871 aaKnown RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 UPK3BL1B0FP48 263 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 C1orf196B1AJZ1 125 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 UPK3BL2E5RIL1 263 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 RASGRP1O95267 797 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 CLDN7O95471 211 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 NUDT14O95848 222 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 MRPL3P09001 348 aaKnown RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 PRSS56P0CW18 603 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 UQCRC2P22695 453 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 ACADLP28330 430 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 EIF2S3P41091 472 aaKnown RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 DNASE1L1P49184 302 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 SMSP52788 366 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 RAB2AP61019 212 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 ADAM8P78325 824 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 RGS1Q08116 209 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 BIKQ13323 160 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 SSX2Q16385 188 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF311Q5JNZ3 666 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 MTFR2Q6P444 385 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 TTC9BQ8N6N2 239 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 TMEM185AQ8NFB2 350 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 BBS10Q8TAM1 723 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 SMPDL3AQ92484 453 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 RNF31Q96EP0 1072 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 ZBED6CLQ96FA7 236 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-205ENST00000397611 ZNF558Q96NG5 402 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 CASD1Q96PB1 797 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 BOCQ9BWV1 1114 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 JAM3Q9BX67 310 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 BTBD1Q9H0C5 482 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 PELI2Q9HAT8 420 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 IFT46Q9NQC8 304 aa5.15□□□□□ -1.58
PTPRD-205ENST00000397611 SHROOM3Q8TF72 1996 aa5.15□□□□□ -1.59
PTPRD-205ENST00000397611 NPIPB15A6NHN6 443 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-205ENST00000397611 HRGP04196 525 aa5.15□□□□□ -1.59
PTPRD-205ENST00000397611 ETV3P41162 512 aa5.15□□□□□ -1.59
PTPRD-205ENST00000397611 KCNJ5P48544 419 aa5.15□□□□□ -1.59
PTPRD-205ENST00000397611 DPTQ07507 201 aa5.15□□□□□ -1.59
PTPRD-205ENST00000397611 RHEBQ15382 184 aa5.15□□□□□ -1.59
PTPRD-205ENST00000397611 DEFB115Q30KQ5 88 aa5.15□□□□□ -1.59
PTPRD-205ENST00000397611 C9orf64Q5T6V5 341 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms