RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ZNF155Q12901 538 aaPredicted RBP12.74□□□□□ -0.37
SEC13-204ENST00000397099 GALNTL6Q49A17 601 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 RFTN2Q52LD8 501 aaPredicted RBP12.74□□□□□ -0.37
SEC13-204ENST00000397099 XKR7Q5GH72 579 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 C1orf185Q5T7R7 199 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 RIPPLY2Q5TAB7 128 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 TMEM107Q6UX40 140 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 ANGPTL8Q6UXH0 198 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 LARP4Q71RC2 724 aaKnown RBP eCLIP12.74□□□□□ -0.37
SEC13-204ENST00000397099 SLC44A2Q8IWA5 706 aaPredicted RBP12.74□□□□□ -0.37
SEC13-204ENST00000397099 OR5M9Q8NGP3 310 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 OR2T11Q8NH01 316 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 PKNOX2Q96KN3 472 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 GNRHR2Q96P88 292 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 ADOQ96SZ5 270 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 TTYH2Q9BSA4 534 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 LMF2Q9BU23 707 aaKnown RBP12.74□□□□□ -0.37
SEC13-204ENST00000397099 KCNJ16Q9NPI9 418 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 SH3BP4Q9P0V3 963 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 NTMQ9P121 344 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 WIF1Q9Y5W5 379 aa12.74□□□□□ -0.37
SEC13-204ENST00000397099 UPK1AO00322 258 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 KCNH1O95259 989 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 HSPA4LO95757 839 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 TACR1P25103 407 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 LCN1P31025 176 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 PEX19P40855 299 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 ZFP36L2P47974 494 aaKnown RBP12.73□□□□□ -0.37
SEC13-204ENST00000397099 CORO7P57737 925 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 PRR5P85299 388 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 PSG6Q00889 435 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 TOMM20Q15388 145 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 TNFAIP8L3Q5GJ75 292 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 CEP85LQ5SZL2 805 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 FNDC7Q5VTL7 733 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 BICRALQ6AI39 1079 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 VASNQ6EMK4 673 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 ZCCHC23Q6ZST2 131 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 EXOC3L1Q86VI1 746 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 PLCZ1Q86YW0 608 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 LRRC34Q8IZ02 419 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 CDRT4Q8N9R6 151 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 SIMC1Q8NDZ2 872 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 RNF138Q8WVD3 245 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 EGLN2Q96KS0 407 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 TSSK3Q96PN8 268 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 NODALQ96S42 347 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 PRDM14Q9GZV8 571 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 CENPHQ9H3R5 247 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 SPRR3Q9UBC9 169 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 ATP6V1HQ9UI12 483 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 ZDHHC2Q9UIJ5 367 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 CBLCQ9ULV8 474 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 RNF6Q9Y252 685 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 EIF3LQ9Y262 564 aaKnown RBP12.73□□□□□ -0.37
SEC13-204ENST00000397099 HRH3Q9Y5N1 445 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 PKDREJQ9NTG1 2253 aa12.73□□□□□ -0.37
SEC13-204ENST00000397099 HSPB2A8KAH6 182 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 GNB5O14775 395 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 LRATO95237 230 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 IL33O95760 270 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 GLI4P10075 376 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 CREB1P16220 341 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 PRPS1L1P21108 318 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 ENDOUP21128 410 aaKnown RBP12.72□□□□□ -0.37
SEC13-204ENST00000397099 SRD5A2P31213 254 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 TRPC1P48995 793 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 SLC18A1P54219 525 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 NUP107P57740 925 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 CRYZQ08257 329 aaKnown RBP12.72□□□□□ -0.37
SEC13-204ENST00000397099 HSPB3Q12988 150 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 GANABQ14697 944 aaKnown RBP12.72□□□□□ -0.37
SEC13-204ENST00000397099 CDSNQ15517 529 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 HSPB2Q16082 182 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 SLC25A35Q3KQZ1 300 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 LSM12Q3MHD2 195 aaKnown RBP12.72□□□□□ -0.37
SEC13-204ENST00000397099 C6orf136Q5SQH8 315 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 FAM219BQ5XKK7 198 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 AAGABQ6PD74 315 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 ENPP6Q6UWR7 440 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 NPSR1Q6W5P4 371 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 LACC1Q8IV20 430 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 ULK2Q8IYT8 1036 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 MARVELD2Q8N4S9 558 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 FNDC5Q8NAU1 212 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 FAM83FQ8NEG4 500 aaPredicted RBP12.72□□□□□ -0.37
SEC13-204ENST00000397099 OR10Q1Q8NGQ4 319 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 ABTB1Q969K4 478 aaPredicted RBP12.72□□□□□ -0.37
SEC13-204ENST00000397099 MOAP1Q96BY2 351 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 TUBGCP3Q96CW5 907 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 LRRC46Q96FV0 321 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 OR2B2Q9GZK3 357 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 SLC6A15Q9H2J7 730 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 ANKRA2Q9H9E1 313 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 RAP2CQ9Y3L5 183 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 FAM215AQ9Y5M1 114 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 PTGDR2Q9Y5Y4 395 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 CREBBPQ92793 2442 aa12.72□□□□□ -0.37
SEC13-204ENST00000397099 TMEM233B4DJY2 109 aa12.71□□□□□ -0.37
SEC13-204ENST00000397099 C19orf84I3L1E1 186 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms