RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ALX3O95076 343 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 SERPIND1P05546 499 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 SLC2A2P11168 524 aaPredicted RBP17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 SLC1A3P43003 542 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 GALK2Q01415 458 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 LASP1Q14847 261 aaKnown RBP17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 TATDN3Q17R31 274 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 FAM46CQ5VWP2 391 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 PLET1Q6UQ28 207 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 Q8N402 240 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 ZC3HAV1LQ96H79 300 aaKnown RBP17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 C17orf62Q9BQA9 187 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 PINK1Q9BXM7 581 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 ACOXLQ9NUZ1 547 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 CNIH4Q9P003 139 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 CLCA2Q9UQC9 943 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 KCNE3Q9Y6H6 103 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 SHISA3A0PJX4 238 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 OR6C70A6NIJ9 312 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 CASC3O15234 703 aaKnown RBP17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 FRS3O43559 492 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 FAM157BP0CG42 384 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 DRD2P14416 443 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 ALAS2P22557 587 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 SSR2P43308 183 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 TAS2R38P59533 333 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 TAS2R41P59536 307 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 TRA2BP62995 288 aaKnown RBP17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 CSNK1G2P78368 415 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 MLLT1Q03111 559 aaPredicted RBP17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 DUSP2Q05923 314 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 ZNF155Q12901 538 aaPredicted RBP17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 TSPAN31Q12999 210 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 EFR3AQ14156 821 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 CLEC12AQ5QGZ9 265 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 C9orf64Q5T6V5 341 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 TRIQKQ629K1 86 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 TANGO2Q6ICL3 276 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 TCTE3Q8IZS6 198 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 ARIH2OSQ8N7S6 290 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 C19orf18Q8NEA5 215 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 OTUB2Q96DC9 234 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 COX14Q96I36 57 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 SLC38A2Q96QD8 506 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 PRRG3Q9BZD7 231 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 ALG5Q9Y673 324 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 NUMA1Q14980 2115 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 MAN2B1O00754 1011 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 STATHP02808 62 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 HMGN2P05204 90 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 CLPPQ16740 277 aaPredicted RBP17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 ZNF750Q32MQ0 723 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 YIPF7Q8N8F6 280 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 LINC01555Q8NAE3 123 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 TMEM145Q8NBT3 493 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 OR4F15Q8NGB8 312 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 C16orf58Q96GQ5 468 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 SENP5Q96HI0 755 aaPredicted RBP17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 FAM46AQ96IP4 442 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 BBS4Q96RK4 519 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 TMED9Q9BVK6 235 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 HDHD5Q9BXW7 423 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 PCBD2Q9H0N5 130 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 TTYH1Q9H313 450 aaPredicted RBP17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 SEMA4GQ9NTN9 838 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 GIMAP4Q9NUV9 329 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 RBFOX1Q9NWB1 397 aaKnown RBP17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 GPR55Q9Y2T6 319 aaPredicted RBP17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 PCDHGB7Q9Y5F8 929 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 MUC22E2RYF6 1773 aaPredicted RBP17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 A0A0G2JPF8 293 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 HNRNPCL2B2RXH8 293 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 FAM25AB3EWG3 89 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 FAM25CB3EWG5 89 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 FAM25GB3EWG6 89 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 HNRNPCL3B7ZW38 293 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 PRRT4C9JH25 899 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 HNRNPCL4P0DMR1 293 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 PSKH1P11801 424 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 NTSP30990 170 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 EVX1P49640 407 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 CDH11P55287 796 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 ADAM15Q13444 863 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 RASSF6Q6ZTQ3 369 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 MARCH9Q86YJ5 346 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 POGLUT1Q8NBL1 392 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 DUSP18Q8NEJ0 188 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 TMIEQ8NEW7 156 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 OR4Q3Q8NH05 313 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 WFIKKN2Q8TEU8 576 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 C17orf50Q8WW18 174 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 OR8D1Q8WZ84 308 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 MYADMQ96S97 322 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 KLHL31Q9H511 634 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 LIPT1Q9Y234 373 aa17.2■□□□□ 0.34
PCDHA1-202ENST00000394633 ERAL1O75616 437 aaKnown RBP17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 CH25HO95992 272 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 CCNYL3P0C7X3 344 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 ADH5P11766 374 aa17.19■□□□□ 0.34
PCDHA1-202ENST00000394633 HSD17B2P37059 387 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms