RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 CLDN4O14493 209 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 H1F0P07305 194 aaKnown RBP17.73■□□□□ 0.43
CLDND1-203ENST00000394181 GCGRP47871 477 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 EMDP50402 254 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 PGDP52209 483 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 EFNA3P52797 238 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 PIGFQ07326 219 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 CDK5R2Q13319 367 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 ZNF267Q14586 743 aaPredicted RBP17.73■□□□□ 0.43
CLDND1-203ENST00000394181 PEAR1Q5VY43 1037 aaPredicted RBP17.73■□□□□ 0.43
CLDND1-203ENST00000394181 TAGAPQ8N103 731 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 COX18Q8N8Q8 333 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 SLC7A13Q8TCU3 470 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 FUZQ9BT04 418 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 MTHFD2LQ9H903 347 aaPredicted RBP17.73■□□□□ 0.43
CLDND1-203ENST00000394181 MAN2C1Q9NTJ4 1040 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 SLC9A8Q9Y2E8 581 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 PEX12O00623 359 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 PRKNO60260 465 aaPredicted RBP17.73■□□□□ 0.43
CLDND1-203ENST00000394181 AGR2O95994 175 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 ANXA8P13928 327 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 CRHBPP24387 322 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 ZNF155Q12901 538 aaPredicted RBP17.73■□□□□ 0.43
CLDND1-203ENST00000394181 PRR23CQ6ZRP0 262 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 CARFQ8N187 725 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 ZNF501Q96CX3 271 aaPredicted RBP17.73■□□□□ 0.43
CLDND1-203ENST00000394181 DGAT2Q96PD7 388 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 GABARAPL3Q9BY60 117 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 FGF21Q9NSA1 209 aa17.73■□□□□ 0.43
CLDND1-203ENST00000394181 RYKP34925 604 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 TRHRP34981 398 aaPredicted RBP17.72■□□□□ 0.43
CLDND1-203ENST00000394181 PSG6Q00889 435 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 NIPAL1Q6NVV3 410 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 TMEM71Q6P5X7 295 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 FBLIM1Q8WUP2 373 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 ARHGDIGQ99819 225 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 ZNF350Q9GZX5 532 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 ZNF768Q9H5H4 540 aaKnown RBP17.72■□□□□ 0.43
CLDND1-203ENST00000394181 DUSP22Q9NRW4 184 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 RASSF1Q9NS23 344 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 ZNF443Q9Y2A4 671 aaPredicted RBP17.72■□□□□ 0.43
CLDND1-203ENST00000394181 SLITRK5O94991 958 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 IFNA16P05015 189 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 RPLP0P05388 317 aaKnown RBP17.72■□□□□ 0.43
CLDND1-203ENST00000394181 RFX3P48380 749 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 EMP3P54852 163 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 NR1H2P55055 460 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 FOXL2P58012 376 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 KEAP1Q14145 624 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 SMN1Q16637 294 aaKnown RBP17.72■□□□□ 0.43
CLDND1-203ENST00000394181 TRIM61Q5EBN2 209 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 PODNL1Q6PEZ8 512 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 ZNF836Q6ZNA1 936 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 TMEM151BQ8IW70 566 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 ARSGQ96EG1 525 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 CNPPD1Q9BV87 410 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 SYNDIG1Q9H7V2 258 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 FOLH1BQ9HBA9 442 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 PCDHGA6Q9Y5G7 932 aa17.72■□□□□ 0.43
CLDND1-203ENST00000394181 SEC16AO15027 2179 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 A0A087WXM4 84 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 TRIM64CA6NLI5 447 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 XPNPEP2O43895 674 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 BCAS1O75363 584 aaPredicted RBP17.71■□□□□ 0.43
CLDND1-203ENST00000394181 IGFBP1P08833 259 aaPredicted RBP17.71■□□□□ 0.43
CLDND1-203ENST00000394181 CDH2P19022 906 aaPredicted RBP17.71■□□□□ 0.43
CLDND1-203ENST00000394181 PRKAR1BP31321 381 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 FMO3P31513 532 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 STT3AP46977 705 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 HSD17B7P56937 341 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 IL18R1Q13478 541 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 VWA2Q5GFL6 755 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 DCST1Q5T197 706 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 KLHL17Q6TDP4 642 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 ARHGAP22Q7Z5H3 698 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 MEX3DQ86XN8 651 aaKnown RBP17.71■□□□□ 0.43
CLDND1-203ENST00000394181 AMER2Q8N7J2 671 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 HDAC2Q92769 488 aaKnown RBP17.71■□□□□ 0.43
CLDND1-203ENST00000394181 TSLPQ969D9 159 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 PTCHD1Q96NR3 888 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 STACQ99469 402 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 FNDC11Q9BVV2 318 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 SLC6A14Q9UN76 642 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 ERVK-19Q9WJR5 959 aa17.71■□□□□ 0.43
CLDND1-203ENST00000394181 AGAP5A6NIR3 686 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 UGT2B17O75795 530 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 BMP10O95393 424 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 IGKV1D-16P01601 117 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 EEF1B2P24534 225 aaKnown RBP17.7■□□□□ 0.42
CLDND1-203ENST00000394181 HLCSP50747 726 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 NNATQ16517 81 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 TMEM236Q5W0B7 351 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 ZCCHC12Q6PEW1 402 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 RBM44Q6ZP01 1051 aaKnown RBP17.7■□□□□ 0.42
CLDND1-203ENST00000394181 PRSS58Q8IYP2 241 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 GPR135Q8IZ08 494 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 ZNF321PQ8N8H1 164 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 BPIFB6Q8NFQ5 453 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 PSD2Q9BQI7 771 aa17.7■□□□□ 0.42
CLDND1-203ENST00000394181 NDC1Q9BTX1 674 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms