RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CPSF4O95639 269 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 HMGN2P05204 90 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 ALOX5P09917 674 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 SOAT1P35610 550 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 MAP3K8P41279 467 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 DGKQP52824 942 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 PSMD4P55036 377 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 STX1BP61266 288 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 FOXO1Q12778 655 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 EIF2S3LQ2VIR3 472 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 DESI1Q6ICB0 168 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 TMEM81Q6P7N7 255 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 PACS2Q86VP3 889 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 ANKRD46Q86W74 232 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 HOXB13Q92826 284 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 C16orf58Q96GQ5 468 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 NODALQ96S42 347 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 SIKE1Q9BRV8 207 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 TTTY12Q9BZ98 90 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 ZFP64Q9NPA5 681 aa17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 FAF1Q9UNN5 650 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-204ENST00000393546 MYO18BQ8IUG5 2567 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 EXPH5Q8NEV8 1989 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 FAM166BA8MTA8 275 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 DYNC1I1O14576 645 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 WISP2O76076 250 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 GLSO94925 669 aaPredicted RBP17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 SOX30O94993 753 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 IL6P05231 212 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 PGRP06401 933 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 KRT16P08779 473 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 GUCY1A3Q02108 690 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 RBPJQ06330 500 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 LRRC74AQ0VAA2 488 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 SNTA1Q13424 505 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 TP53BP2Q13625 1128 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 LASP1Q14847 261 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 HYAL4Q2M3T9 481 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 BICRALQ6AI39 1079 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 SLC30A6Q6NXT4 461 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 SLC16A11Q8NCK7 471 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 PRR7Q8TB68 274 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 STON2Q8WXE9 905 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 JADE3Q92613 823 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 EFHD2Q96C19 240 aaPredicted RBP17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 THOC1Q96FV9 657 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 CHMP6Q96FZ7 201 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 JSRP1Q96MG2 331 aaPredicted RBP17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 RILPQ96NA2 401 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 OR52E6Q96RD3 313 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 YIPF4Q9BSR8 244 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 ACTRT3Q9BYD9 372 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 NPHS2Q9NP85 383 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 BTNL2Q9UIR0 455 aa17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 GCN1Q92616 2671 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-204ENST00000393546 GXYLT2A0PJZ3 443 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 C9JVG2 144 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 TRIM3O75382 744 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 IL33O95760 270 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 VIMP08670 466 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 ACP2P11117 423 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 UQCRC2P22695 453 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 MASP1P48740 699 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 KCNK10P57789 538 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 IRX1P78414 480 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 CDC73Q6P1J9 531 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 PAOXQ6QHF9 649 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 C6orf120Q7Z4R8 191 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 GHDCQ8N2G8 530 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 TMEM251Q8N6I4 163 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 OR52N2Q8NGI0 321 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 OR5AK3PQ8NH89 298 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 FBXO30Q8TB52 745 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 ADAMTS15Q8TE58 950 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 PIK3R3Q92569 461 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 ZNF597Q96LX8 424 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 CCDC115Q96NT0 180 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 DEFB127Q9H1M4 99 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 KLRF1Q9NZS2 232 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 DCTN4Q9UJW0 460 aa17.41■□□□□ 0.38
PDLIM7-204ENST00000393546 PRAMEF25A6NGN4 478 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 ICOSLGO75144 302 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 CYP4B1P13584 511 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 MDH1P40925 334 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 RFX3P48380 749 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 MRPL19P49406 292 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 POLR2JP52435 117 aaKnown RBP17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 SLC10A1Q14973 349 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 DUSP5Q16690 384 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 CMPK2Q5EBM0 449 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 FAM109AQ8N4B1 249 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 COX18Q8N8Q8 333 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 RFWD2Q8NHY2 731 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 RMND5BQ96G75 393 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 TMEM41AQ96HV5 264 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 STACQ99469 402 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 OSBPL11Q9BXB4 747 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 PIGUQ9H490 435 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 CCDC134Q9H6E4 229 aa17.4■□□□□ 0.38
PDLIM7-204ENST00000393546 DUSP22Q9NRW4 184 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms