RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CTSWP56202 376 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 PSMC5P62195 406 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 GTDC1Q4AE62 458 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 DCAF12Q5T6F0 453 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 OR4F3Q6IEY1 312 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 PNCKQ6P2M8 343 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 TIPARPQ7Z3E1 657 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 GOLGA7Q7Z5G4 137 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ERICH1Q86X53 443 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 MUC20Q8N307 709 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 MYLPFQ96A32 169 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SNRNP40Q96DI7 357 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 FEM1AQ9BSK4 669 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 SYT11Q9BT88 431 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 DUSP16Q9BY84 665 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 CACYBPQ9HB71 228 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 SLC25A19Q9HC21 320 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 MKKSQ9NPJ1 570 aaPredicted RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 LHX3Q9UBR4 397 aa3.29□□□□□ -1.88
XRN1-202ENST00000392981 ZFR2Q9UPR6 939 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 WBP11Q9Y2W2 641 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 SRPRBQ9Y5M8 271 aaKnown RBP3.29□□□□□ -1.88
XRN1-202ENST00000392981 SPATA31A1Q5TZJ5 1347 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 SPATA31A5Q5VU36 1347 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 SPATA31A7Q8IWB4 1347 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 ATXN2Q99700 1313 aaKnown RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 LOC105371242A0A075B767 164 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 M0R3G1 203 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 SIVA1O15304 175 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 ENTPD5O75356 428 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 ASS1P00966 412 aaKnown RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 CALM1P0DP23 149 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 CALM2P0DP24 149 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 CALM3P0DP25 149 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 SRMP19623 302 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 GYG1P46976 350 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 OR3A1P47881 315 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 SIM1P81133 766 aaPredicted RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 IL9RQ01113 521 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 SYPL1Q16563 259 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 CCDC153Q494R4 210 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 Q6ZRG5 221 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 TBC1D10CQ8IV04 446 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 ZNF781Q8N8C0 355 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 GTF2H4Q92759 462 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.28□□□□□ -1.88
XRN1-202ENST00000392981 ASB9Q96DX5 294 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 ZNF641Q96N77 438 aaPredicted RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 RASL10BQ96S79 203 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 ELL3Q9HB65 397 aaPredicted RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 EML4Q9HC35 981 aaKnown RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 DUSP22Q9NRW4 184 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 GCC2Q8IWJ2 1684 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 KDM5CP41229 1560 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 NUP153P49790 1475 aaKnown RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 CBY3A6NI87 242 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 LINC00473A8K010 186 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 FAM166BA8MTA8 275 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 PPP6CO00743 305 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 F10P00742 488 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 HSPD1P10809 573 aaKnown RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 ATP1B2P14415 290 aaPredicted RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 MAP3K8P41279 467 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 CCT3P49368 545 aaKnown RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 ESRRGP62508 458 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 NPTX1Q15818 432 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 NRN1LQ496H8 165 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 TCTN3Q6NUS6 607 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 FAM122CQ6P4D5 195 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 TECPR1Q7Z6L1 1165 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 BBS10Q8TAM1 723 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 SLC7A13Q8TCU3 470 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 EME1Q96AY2 570 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 HIPK2Q9H2X6 1198 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 UFSP2Q9NUQ7 469 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 RIPK3Q9Y572 518 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 PFASO15067 1338 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 CARMIL1Q5VZK9 1371 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 SPHKAPQ2M3C7 1700 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 NPEPPSL1A6NEC2 478 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 AHRRA9YTQ3 701 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 ZFPL1O95159 310 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 KRT75O95678 551 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 PGK1P00558 417 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 CHRNA1P02708 482 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 PLEKP08567 350 aaPredicted RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 S100A1P23297 94 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 NAMPTP43490 491 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 NKX2-1P43699 371 aaPredicted RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 ARHGDIAP52565 204 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 CTSCP53634 463 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 PKNOX1P55347 436 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 OGDHQ02218 1023 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 AANATQ16613 207 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 PCK2Q16822 640 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 RNASE12Q5GAN4 147 aaKnown RBP3.28□□□□□ -1.88
XRN1-202ENST00000392981 MANEAQ5SRI9 462 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 TPGS1Q6ZTW0 290 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 TFAP2DQ7Z6R9 452 aa3.28□□□□□ -1.88
XRN1-202ENST00000392981 ARHGEF19Q8IW93 802 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms