RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 AKAP3O75969 853 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ERLIN2O94905 339 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 NDST3O95803 873 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ANGPTL1O95841 491 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 NUDT14O95848 222 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 GOT2P00505 430 aaKnown RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 MOSP00540 346 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 IGHV3-9P01782 118 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 HIST1H2ABP04908 130 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 KRT18P05783 430 aaKnown RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 RB1P06400 928 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 APRTP07741 180 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 STSP08842 583 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 WNT2P09544 360 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 CSF1P09603 554 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 GIPP09681 153 aaPredicted RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 CCDC159P0C7I6 412 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC35G6P0C7Q6 338 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 TLX1NBP0CAT3 122 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF705DP0CH99 300 aaPredicted RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF705BP0CI00 300 aaPredicted RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 IGHV1-8P0DP01 117 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 IL1RNP18510 177 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 CDH2P19022 906 aaPredicted RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 HIST1H2ADP20671 130 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 TBXA2RP21731 343 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 IDSP22304 550 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ABCD3P28288 659 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 HNRNPH3P31942 346 aaKnown RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 OTX1P32242 354 aaPredicted RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 CDAP32320 146 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 HPDP32754 393 aaPredicted RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 NF2P35240 595 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 FEN1P39748 380 aaKnown RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 OPRK1P41145 380 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 CETN2P41208 172 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ASMTP46597 345 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 OR1D4P47884 311 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC6A8P48029 635 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ALDH3B2P48448 385 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 IDH2P48735 452 aaKnown RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC11A1P49279 550 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 VAMP7P51809 220 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 UBE2E1P51965 193 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 RBM5P52756 815 aaKnown RBP eCLIP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 NKX2-5P52952 324 aaPredicted RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 HCCSP53701 268 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 EVCP57679 992 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ESRRGP62508 458 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 RPS6P62753 249 aaKnown RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 RAP1AP62834 184 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 KCNJ2P63252 427 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 CACNA1BQ00975 2339 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 SPIBQ01892 262 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 FOLH1Q04609 750 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 LOXL1Q08397 574 aaPredicted RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF763Q0D2J5 394 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ASPHQ12797 758 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 PDCLQ13371 301 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 PRPF4BQ13523 1007 aaKnown RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ATRQ13535 2644 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 KLF5Q13887 457 aaPredicted RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 VGLL4Q14135 290 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 EFR3AQ14156 821 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ODF1Q14990 250 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 NAA25Q14CX7 972 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 MAD2L1BPQ15013 274 aaPredicted RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 BRD3Q15059 726 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 RASA2Q15283 850 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 CA9Q16790 459 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 DUSP7Q16829 419 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 CCDC27Q2M243 656 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ASB16-AS1Q495Z4 193 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 IGSF11Q5DX21 431 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 MS4A13Q5J8X5 152 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ACER2Q5QJU3 275 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ARHGAP21Q5T5U3 1957 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 IFIT1BQ5T764 474 aaKnown RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 TTC22Q5TAA0 569 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 IL23RQ5VWK5 629 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 FAM219BQ5XKK7 198 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 RALGAPA1Q6GYQ0 2036 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 OR4C11Q6IEV9 310 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 OR4A47Q6IF82 309 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 APOBEC3HQ6NTF7 200 aaKnown RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 C11orf63Q6NUN7 778 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 MFSD12Q6NUT3 480 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 NEPROQ6NW34 567 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC30A6Q6NXT4 461 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ENPP7Q6UWV6 458 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 TMEM184AQ6ZMB5 413 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF621Q6ZSS3 439 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 C15orf52Q6ZUT6 534 aaKnown RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 LHFPL2Q6ZUX7 228 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 TMPRSS11FQ6ZWK6 438 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 HIST3H2AQ7L7L0 130 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 RRM2BQ7LG56 351 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 CSMD3Q7Z407 3707 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 SRLQ86TD4 932 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 COA5Q86WW8 74 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms