RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 HSD17B2P37059 387 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 PIP5KL1Q5T9C9 394 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 SAXO2Q658L1 398 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 CCSAPQ6IQ19 270 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 WDR53Q7Z5U6 358 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 HSPA12BQ96MM6 686 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 OPALINQ96PE5 141 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 PRR14Q9BWN1 585 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 DPH1Q9BZG8 443 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 B3GNT4Q9C0J1 378 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 QRSL1Q9H0R6 528 aaKnown RBP12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC39A1Q9NY26 324 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 GABRQQ9UN88 632 aa12.42□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF860A6NHJ4 632 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 TRIM3O75382 744 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 HMGN2P05204 90 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 GUCA1AP43080 201 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 SEC23BQ15437 767 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 RPTNQ6XPR3 784 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 CREB3L2Q70SY1 520 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 TMEM25Q86YD3 366 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR14C36Q8NHC7 312 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 TMEM163Q8TC26 289 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 RBM18Q96H35 190 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF582Q96NG8 517 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 NUBP2Q9Y5Y2 271 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 CSF3P09919 207 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 DDCP20711 480 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 GABRA5P31644 462 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 CSNK1DP48730 415 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 TAS2R38P59533 333 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 ASAH1Q13510 395 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF805Q5CZA5 627 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 LDLRAD1Q5T700 205 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 ELP2Q6IA86 826 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 TAF8Q7Z7C8 310 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 CCDC190Q86UF4 302 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR4N5Q8IXE1 308 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 ARMC10Q8N2F6 343 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 FBXO15Q8NCQ5 510 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR5AR1Q8NGP9 310 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR5W2Q8NH69 310 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 PMEPA1Q969W9 287 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC25A46Q96AG3 418 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 PITX2Q99697 317 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 CDCA4Q9BXL8 241 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 METTL17Q9H7H0 456 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 MYNNQ9NPC7 610 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 FARSAQ9Y285 508 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 PLEKHA6Q9Y2H5 1048 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 ASB4Q9Y574 426 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 AP1M2Q9Y6Q5 423 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC22A31A6NKX4 558 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 BLOC1S5-TXNDC5H3BN57 136 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 ARPC1BO15143 372 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 B3GALT2O43825 422 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 ENDOUP21128 410 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 PSMA3P25788 255 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 ELAVL4P26378 380 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC22A10Q63ZE4 541 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 PEG10Q86TG7 708 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 INO80EQ8NBZ0 244 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 TRIB2Q92519 343 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 TMEM185BQ9H7F4 350 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 CXorf36Q9H7Y0 433 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 LYARQ9NX58 379 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 AHDC1Q5TGY3 1603 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 CACNA1CQ13936 2221 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 A0A1B0GVI7 797 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 MCIDASD6RGH6 385 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 DSCR3O14972 297 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 GATBO75879 557 aaKnown RBP12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 RBBP9O75884 186 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 KRT33AO76009 404 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 SOX30O94993 753 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 AHCYP23526 432 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC1A3P43003 542 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 DNASE1L1P49184 302 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 PFN3P60673 137 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 GALNTL5Q7Z4T8 443 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 TMC8Q8IU68 726 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZFAND1Q8TCF1 268 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 IGSF21Q96ID5 467 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR2A14Q96R47 310 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 TMEM175Q9BSA9 504 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 PLCL2Q9UPR0 1127 aa12.41□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZFC3H1O60293 1989 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR6C74A6NCV1 312 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 A8MUA0 341 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 B8ZZF3 427 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 H0YIV9 168 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF780AO75290 641 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC43A1O75387 559 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 GNALP38405 381 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 RPL35P42766 123 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 TP53I3Q53FA7 332 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 LYPD4Q6UWN0 246 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 TMPRSS12Q86WS5 348 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 CALHM3Q86XJ0 350 aa12.4□□□□□ -0.42
TRAPPC9-201ENST00000389328 PDZD9Q8IXQ8 264 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms