RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 KIAA0754O94854 1291 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 IGLV2-23P01705 113 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 IRF1P10914 325 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TRIM21P19474 475 aaKnown RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CXCL12P48061 93 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CEBPDP49716 269 aaPredicted RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 FOXA1P55317 472 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 OC90Q02509 493 aaPredicted RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 BCL2L1Q07817 233 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CTBP1Q13363 440 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SLC10A1Q14973 349 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 HSPB2Q16082 182 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PSG3Q16557 428 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 C2orf68Q2NKX9 166 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MAJINQ3KP22 176 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 DPCR1Q3MIW9 517 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TMEM176BQ3YBM2 270 aaPredicted RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SAMD4BQ5PRF9 694 aaKnown RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 FAM69AQ5T7M9 428 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 FAM222AQ5U5X8 452 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 ATF7IP2Q5U623 682 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 LMBRD2Q68DH5 695 aaPredicted RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PPP4R4Q6NUP7 873 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MZT2AQ6P582 158 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PAPD4Q6PIY7 484 aaKnown RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TBPL2Q6SJ96 375 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SYNE3Q6ZMZ3 975 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PRSS42Q7Z5A4 293 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CTAGE6Q86UF2 777 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 ZNF679Q8IYX0 411 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MINDY2Q8NBR6 621 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 GJC3Q8NFK1 279 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 OR13G1Q8NGZ3 307 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 UTP15Q8TED0 518 aaKnown RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 ANKRD49Q8WVL7 239 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 EXT2Q93063 718 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 NEDD4LQ96PU5 975 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PSMD1Q99460 953 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 RASL11BQ9BPW5 248 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 HIGD2AQ9BW72 106 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CADM1Q9BY67 442 aaKnown RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 LIME1Q9H400 295 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 C12orf10Q9HB07 376 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SMYD2Q9NRG4 433 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 ZNF277Q9NRM2 450 aaPredicted RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PNPLA3Q9NST1 481 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 GINM1Q9NU53 330 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TMLHEQ9NVH6 421 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MLXQ9UH92 298 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 GPR34Q9UPC5 381 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CORO2BQ9UQ03 480 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 UBE2J1Q9Y385 318 aaPredicted RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TMEM184BQ9Y519 407 aaPredicted RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MAB21L2Q9Y586 359 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 COPG1Q9Y678 874 aaKnown RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CENPEQ02224 2701 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 VWA8A3KMH1 1905 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 RTL1A6NKG5 1358 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 A0A0A6YYD4 124 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 IGHV5-51A0A0C4DH38 117 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 IQCA1LA6NCM1 817 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TMEM202A6NGA9 273 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 AQP7P3A6NL99 342 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 A8MXQ7 604 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MANBAO00462 879 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MFNGO00587 321 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SLC17A2O00624 439 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 RAD51BO15315 384 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PLOD3O60568 738 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 AKAP3O75969 853 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CER1O95813 267 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 FTCDO95954 541 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 ARG1P05089 322 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 RPLP0P05388 317 aaKnown RBP-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 H1F0P07305 194 aaKnown RBP-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MMP7P09237 267 aaPredicted RBP-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CT62P0C5K7 136 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 AGAP20933 346 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 IGHV1-2P23083 117 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PAX6P26367 422 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SKIV2L2P42285 1042 aaKnown RBP-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 GSTM5P46439 218 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CX3CR1P49238 355 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SLC5A3P53794 718 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 FXYD6P3P58550 94 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 STARD6P59095 220 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TSPAN31Q12999 210 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 KCNAB1Q14722 419 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 KLHL12Q53G59 568 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 Q5VSD8 79 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 NAA35Q5VZE5 725 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 GGNBP1Q5YKI7 109 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CES5AQ6NT32 575 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 ZFP1Q6P2D0 407 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 ENOSF1Q7L5Y1 443 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 BNIPLQ7Z465 357 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PRPF39Q86UA1 669 aaKnown RBP-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 ANGPTL5Q86XS5 388 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 FBXW8Q8N3Y1 598 aa-2.82□□□□□ -2.86
RNU6-1340P-201ENST00000384438 LINC00471Q8N535 108 aa-2.82□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms