RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 CCNYL3P0C7X3 344 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 CCR8P51685 355 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 SNRPD2P62316 118 aaKnown RBP15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 EFNB1P98172 346 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 CDK5Q00535 292 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 EFR3AQ14156 821 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 CCDC58Q4VC31 144 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 AGBL4Q5VU57 503 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 SYCE2Q6PIF2 218 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 FAM92BQ6ZTR7 304 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 Q8N402 240 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 UBE2E3Q969T4 207 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 SLC35G5Q96KT7 338 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 NLKQ9UBE8 527 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 P2RX2Q9UBL9 471 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 GPR55Q9Y2T6 319 aaPredicted RBP15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 NUP210Q8TEM1 1887 aaPredicted RBP15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 MYO10Q9HD67 2058 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 C17orf113A0A1B0GUU1 675 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 C2orf92A0A1B0GVN3 265 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 ERVH48-1M5A8F1 160 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 NR2F6P10588 404 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 MAPK9P45984 424 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 LASP1Q14847 261 aaKnown RBP15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 QSOX2Q6ZRP7 698 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 GDPD1Q8N9F7 314 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 SENP5Q96HI0 755 aaPredicted RBP15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 GFM1Q96RP9 751 aaKnown RBP15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 SAP130Q9H0E3 1048 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 NKX2-4Q9H2Z4 354 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 KLHL31Q9H511 634 aa15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 ZFR2Q9UPR6 939 aaKnown RBP15.27■□□□□ 0.03
NKX3-1-201ENST00000380871 BRWD1Q9NSI6 2320 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 A0A087WUU8 490 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 EPOPA6NHQ4 379 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 LGI1O95970 557 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 ALPPP05187 535 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 SLC2A2P11168 524 aaPredicted RBP15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 FCARP24071 287 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 AVPR1BP47901 424 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 DUSP2Q05923 314 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 QPRTQ15274 297 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 ZNF791Q3KP31 576 aaPredicted RBP15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 YIF1BQ5BJH7 314 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 C16orf58Q96GQ5 468 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 FAM46AQ96IP4 442 aaKnown RBP15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 FCRL4Q96PJ5 515 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 AICDAQ9GZX7 198 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 ALG5Q9Y673 324 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 A0A0G2JMP0 313 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 YES1P07947 543 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 MTNR1AP48039 350 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 GPLD1P80108 840 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 METRNLQ641Q3 311 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 SLC30A6Q6NXT4 461 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 ZNF765Q7L2R6 523 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 PRICKLE2Q7Z3G6 844 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 BBS1Q8NFJ9 593 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 OR5K2Q8NHB8 316 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 UPRTQ96BW1 309 aa15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 TRMT61BQ9BVS5 477 aaKnown RBP15.26■□□□□ 0.03
NKX3-1-201ENST00000380871 SLC30A4O14863 429 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 AKR7A2O43488 359 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 ACP2P11117 423 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 C3orf38Q5JPI3 329 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 RNLSQ5VYX0 342 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 LCTLQ6UWM7 567 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 SIMC1Q8NDZ2 872 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 OR8K5Q8NH50 307 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 UFD1Q92890 307 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 DPH7Q9BTV6 452 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 CD93Q9NPY3 652 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 EQTNQ9NQ60 294 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 RPRD1BQ9NQG5 326 aaKnown RBP15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 LOC102723532A0A0G2JNH3 316 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 CD8B2A6NJW9 211 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 CPSF4LA6NMK7 179 aaKnown RBP15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 NOTOA8MTQ0 251 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 ISM1B1AKI9 464 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 CD8BP10966 210 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 NCBP2P52298 156 aaKnown RBP eCLIP15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 ALDH6A1Q02252 535 aaKnown RBP15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 IL18Q14116 193 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 NDUFAF5Q5TEU4 345 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 KIAA1161Q6NSJ0 714 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 C1orf94Q6P1W5 598 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 PLET1Q6UQ28 207 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 ZNF793Q6ZN11 406 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 RTL10Q7L3V2 364 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 ANKK1Q8NFD2 765 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 TMEM163Q8TC26 289 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 SETD7Q8WTS6 366 aaKnown RBP15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 AMDHD1Q96NU7 426 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 PHPT1Q9NRX4 125 aaPredicted RBP15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 SCN3AQ9NY46 2000 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 PRUNE2Q8WUY3 3088 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 A0A0X1KG70 313 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 C4orf51C9J302 202 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 C5orf67F2Z3F1 127 aa15.25■□□□□ 0.03
NKX3-1-201ENST00000380871 NDUFS4O43181 175 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms