RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 SUPT3HO75486 399 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 CD8AP01732 235 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 ATP1B1P05026 303 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 CD3EP07766 207 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 FCGR2AP12318 317 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 PCSK2P16519 638 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 CORO7P57737 925 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 MRPS35P82673 323 aaKnown RBP15.5■□□□□ 0.07
HMGN1-203ENST00000380748 VLDLRP98155 873 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 FASTKD3Q14CZ7 662 aaKnown RBP15.5■□□□□ 0.07
HMGN1-203ENST00000380748 CPSF6Q16630 551 aaKnown RBP eCLIP15.5■□□□□ 0.07
HMGN1-203ENST00000380748 NCMAPQ5T1S8 102 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 METTL25Q8N6Q8 603 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 SPC24Q8NBT2 197 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 KBTBD8Q8NFY9 601 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 OR2M3Q8NG83 312 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 S100PBPQ96BU1 408 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 TSPAN17Q96FV3 270 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 UBXN10Q96LJ8 280 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 LRRC1Q9BTT6 524 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 STMN4Q9H169 189 aaPredicted RBP15.5■□□□□ 0.07
HMGN1-203ENST00000380748 PPP4R1LQ9P1A2 415 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 PRODH2Q9UF12 536 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 CES1P1Q9UKY3 287 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 GPR52Q9Y2T5 361 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 TENM1Q9UKZ4 2725 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 PCNX3Q9H6A9 2034 aa15.5■□□□□ 0.07
HMGN1-203ENST00000380748 GOLGA6L10A6NI86 522 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 SCO2O43819 266 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 ERAL1O75616 437 aaKnown RBP15.49■□□□□ 0.07
HMGN1-203ENST00000380748 PLGP00747 810 aaPredicted RBP15.49■□□□□ 0.07
HMGN1-203ENST00000380748 KLK1P06870 262 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 ZNF16P17020 682 aaPredicted RBP15.49■□□□□ 0.07
HMGN1-203ENST00000380748 PSMB1P20618 241 aaKnown RBP15.49■□□□□ 0.07
HMGN1-203ENST00000380748 IVDP26440 423 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 PIK3CGP48736 1102 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 CTBP2P56545 445 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 EFR3AQ14156 821 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 SGCBQ16585 318 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 LIPJQ5W064 366 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 FAM180BQ6P0A1 224 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 SLC48A1Q6P1K1 146 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 IL17RELQ6ZVW7 336 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 LARP4Q71RC2 724 aaKnown RBP eCLIP15.49■□□□□ 0.071e-8■■■■■ 31.7
HMGN1-203ENST00000380748 OR10H5Q8NGA6 315 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 WDR20Q8TBZ3 569 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 GFM2Q969S9 779 aaKnown RBP15.49■□□□□ 0.07
HMGN1-203ENST00000380748 LRRC39Q96DD0 335 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 C11orf24Q96F05 449 aaPredicted RBP15.49■□□□□ 0.07
HMGN1-203ENST00000380748 BTBD9Q96Q07 612 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 TRAF4Q9BUZ4 470 aaPredicted RBP15.49■□□□□ 0.07
HMGN1-203ENST00000380748 OR10A4Q9H209 315 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 ANKRA2Q9H9E1 313 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 ZBTB26Q9HCK0 441 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 MED11Q9P086 117 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 WHRNQ9P202 907 aa15.49■□□□□ 0.07
HMGN1-203ENST00000380748 MALRD1Q5VYJ5 2156 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 PGRMC1O00264 195 aaKnown RBP15.48■□□□□ 0.07
HMGN1-203ENST00000380748 SS18L1O75177 396 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-203ENST00000380748 CT45A8P0DMV1 189 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 CT45A9P0DMV2 189 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 STMN1P16949 149 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 SRD5A1P18405 259 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 IL11P20809 199 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 IL12BP29460 328 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 RPS3AP61247 264 aaKnown RBP15.48■□□□□ 0.07
HMGN1-203ENST00000380748 DLG1Q12959 904 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 SLMAPQ14BN4 828 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 TSC22D1Q15714 1073 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 CT45A2Q5DJT8 189 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 NPSR1Q6W5P4 371 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 BEND4Q6ZU67 534 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 ISCA2Q86U28 154 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 ZNF619Q8N2I2 560 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 STAG3L4Q8TBR4 150 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 EFHD2Q96C19 240 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-203ENST00000380748 GMPPAQ96IJ6 420 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-203ENST00000380748 ATOH8Q96SQ7 321 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 NAP1L3Q99457 506 aaPredicted RBP15.48■□□□□ 0.07
HMGN1-203ENST00000380748 PRRG4Q9BZD6 226 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 FOLH1BQ9HBA9 442 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 NSMCE4AQ9NXX6 385 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 ANGPTL3Q9Y5C1 460 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 PCDHA9Q9Y5H5 950 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 FREM1Q5H8C1 2179 aa15.48■□□□□ 0.07
HMGN1-203ENST00000380748 FOXE1O00358 373 aaPredicted RBP15.47■□□□□ 0.07
HMGN1-203ENST00000380748 SEMA3DO95025 777 aa15.47■□□□□ 0.07
HMGN1-203ENST00000380748 CSNK2A2P19784 350 aaPredicted RBP15.47■□□□□ 0.07
HMGN1-203ENST00000380748 PTNP21246 168 aa15.47■□□□□ 0.07
HMGN1-203ENST00000380748 DEKP35659 375 aaKnown RBP15.47■□□□□ 0.07
HMGN1-203ENST00000380748 KRT20P35900 424 aa15.47■□□□□ 0.07
HMGN1-203ENST00000380748 EIF1AXP47813 144 aaKnown RBP15.47■□□□□ 0.07
HMGN1-203ENST00000380748 LOXL1Q08397 574 aaPredicted RBP15.47■□□□□ 0.07
HMGN1-203ENST00000380748 STX5Q13190 355 aa15.47■□□□□ 0.07
HMGN1-203ENST00000380748 MORF4L2Q15014 288 aa15.47■□□□□ 0.07
HMGN1-203ENST00000380748 ZKSCAN8Q15776 578 aaPredicted RBP15.47■□□□□ 0.07
HMGN1-203ENST00000380748 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.47■□□□□ 0.07
HMGN1-203ENST00000380748 ZNF662Q6ZS27 426 aa15.47■□□□□ 0.07
HMGN1-203ENST00000380748 GGNQ86UU5 652 aa15.47■□□□□ 0.07
HMGN1-203ENST00000380748 FBXO36Q8NEA4 188 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms