RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 FCRL6Q6DN72 434 aa20.16■□□□□ 0.82
TRIM54-202ENST00000380075 DCDC5Q6ZRR9 648 aa20.16■□□□□ 0.82
TRIM54-202ENST00000380075 USP53Q70EK8 1073 aa20.16■□□□□ 0.82
TRIM54-202ENST00000380075 ZER1Q7Z7L7 766 aa20.16■□□□□ 0.82
TRIM54-202ENST00000380075 FAM26EQ8N5C1 309 aa20.16■□□□□ 0.82
TRIM54-202ENST00000380075 ZNF655Q8N720 491 aaPredicted RBP20.16■□□□□ 0.82
TRIM54-202ENST00000380075 ZFYVE21Q9BQ24 234 aa20.16■□□□□ 0.82
TRIM54-202ENST00000380075 DUSP15Q9H1R2 295 aaPredicted RBP20.16■□□□□ 0.82
TRIM54-202ENST00000380075 MMP27Q9H306 513 aa20.16■□□□□ 0.82
TRIM54-202ENST00000380075 CACYBPQ9HB71 228 aaKnown RBP20.16■□□□□ 0.82
TRIM54-202ENST00000380075 DAPP1Q9UN19 280 aa20.16■□□□□ 0.82
TRIM54-202ENST00000380075 IFT52Q9Y366 437 aa20.16■□□□□ 0.82
TRIM54-202ENST00000380075 PCDHGA3Q9Y5H0 932 aa20.16■□□□□ 0.82
TRIM54-202ENST00000380075 A0A1W2PS29 197 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 OR6C74A6NCV1 312 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 OR5K4A6NMS3 321 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 C2orf74A8MZ97 194 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 ZSCAN9O15535 394 aaPredicted RBP20.15■□□□□ 0.82
TRIM54-202ENST00000380075 POLR2CP19387 275 aaPredicted RBP20.15■□□□□ 0.82
TRIM54-202ENST00000380075 CSTF2P33240 577 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRIM54-202ENST00000380075 CHRNEQ04844 493 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 PLK5Q496M5 336 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 MFSD12Q6NUT3 480 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 Q6ZSR6 202 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 ABI3BPQ7Z7G0 1075 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 TRIM73Q86UV7 250 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 AMER2Q8N7J2 671 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 GPBAR1Q8TDU6 330 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 ABTB1Q969K4 478 aaPredicted RBP20.15■□□□□ 0.82
TRIM54-202ENST00000380075 IL4I1Q96RQ9 567 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 EQTNQ9NQ60 294 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 TRBV23OR9-2A0A075B6M9 112 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 CTSVO60911 334 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 TAS2R41P59536 307 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 ST3GAL3Q11203 375 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 TRAM2Q15035 370 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 ZC3H14Q6PJT7 736 aaKnown RBP20.15■□□□□ 0.82
TRIM54-202ENST00000380075 C19orf48Q6RUI8 117 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 IQCHQ86VS3 1027 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 OR2L13Q8N349 312 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 MFSD4AQ8N468 514 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 GNPDA2Q8TDQ7 276 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 KAT2AQ92830 837 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 RERGQ96A58 199 aaPredicted RBP20.15■□□□□ 0.82
TRIM54-202ENST00000380075 MGLLQ99685 303 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 GSDMCQ9BYG8 508 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 CCDC59Q9P031 241 aaKnown RBP20.15■□□□□ 0.82
TRIM54-202ENST00000380075 MKLN1Q9UL63 735 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 SLC22A7Q9Y694 548 aa20.15■□□□□ 0.82
TRIM54-202ENST00000380075 MDC1Q14676 2089 aaKnown RBP20.15■□□□□ 0.82
TRIM54-202ENST00000380075 PRAMEF26H0Y7S4 382 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 IGHV4-34P06331 123 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 LIMK1P53667 647 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 ITGADQ13349 1161 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 TCEA2Q15560 299 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 LTB4RQ15722 352 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 ZNF404Q494X3 552 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 PMS2CLQ68D20 193 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 KIAA0895LQ68EN5 471 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 OLIG3Q7RTU3 272 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 ABCA7Q8IZY2 2146 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 TOR1AIP2Q8NFQ8 470 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 CADM4Q8NFZ8 388 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 OR10G6Q8NH81 332 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 WDR36Q8NI36 951 aaKnown RBP20.14■□□□□ 0.81
TRIM54-202ENST00000380075 ATOH1Q92858 354 aaPredicted RBP20.14■□□□□ 0.81
TRIM54-202ENST00000380075 TMEM80Q96HE8 168 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 ALOXE3Q9BYJ1 711 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 ZBTB20Q9HC78 741 aaPredicted RBP20.14■□□□□ 0.81
TRIM54-202ENST00000380075 FAM86C1Q9NVL1 165 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 SPACA6W5XKT8 324 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 SNRNP200O75643 2136 aaKnown RBP20.14■□□□□ 0.81
TRIM54-202ENST00000380075 FRYLO94915 3013 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 KIR2DS5A0A0G2JLQ3 304 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 A0A0G2JNG1 304 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 METTL12A8MUP2 240 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 KIR2DS3K7RE56 304 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 KPNA4O00629 521 aaPredicted RBP20.14■□□□□ 0.81
TRIM54-202ENST00000380075 P2RX6O15547 441 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 CYP7B1O75881 506 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 IFI6P09912 130 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 ALOX12P18054 663 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 TNNI3P19429 210 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 PCYT1AP49585 367 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 CCR5P51681 352 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 SMSP52788 366 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 CDK5Q00535 292 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 KIR2DS5Q14953 304 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 LPAL2Q16609 132 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 DEFB134Q4QY38 66 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 C11orf74Q86VG3 221 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 CENPSQ8N2Z9 138 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 OR7G2Q8NG99 324 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 MCFD2Q8NI22 146 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 ZCCHC10Q8TBK6 192 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 SLC35A4Q96G79 324 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 ZC3H10Q96K80 434 aaKnown RBP20.14■□□□□ 0.81
TRIM54-202ENST00000380075 HSPA12BQ96MM6 686 aa20.14■□□□□ 0.81
TRIM54-202ENST00000380075 MTHFD2LQ9H903 347 aaPredicted RBP20.14■□□□□ 0.81
TRIM54-202ENST00000380075 CPNE7Q9UBL6 633 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms