RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 LINGO3P0C6S8 592 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 ANXA8P13928 327 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 PRKAR1BP31321 381 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 GABRA3P34903 492 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 ISL1P61371 349 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 PSG6Q00889 435 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 RAPSNQ13702 412 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 DSG2Q14126 1118 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 ZNF267Q14586 743 aaPredicted RBP16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 SEC23BQ15437 767 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 CTU2Q2VPK5 515 aaKnown RBP16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 FOXB2Q5VYV0 432 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 DHRS4L2Q6PKH6 230 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 CLIP4Q8N3C7 705 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 FUZQ9BT04 418 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 YIPF2Q9BWQ6 316 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 GABARAPL3Q9BY60 117 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 SAP130Q9H0E3 1048 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 FOLH1BQ9HBA9 442 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 DTX4Q9Y2E6 619 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 HCN4Q9Y3Q4 1203 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 NUP210LQ5VU65 1888 aa16.15■□□□□ 0.18
THUMPD2-201ENST00000378727 FRS3O43559 492 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 TPST2O60704 377 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 H1F0P07305 194 aaKnown RBP16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 CDH2P19022 906 aaPredicted RBP16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 ELAVL4P26378 380 aaKnown RBP16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 EFNA3P52797 238 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 CD47Q08722 323 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 NPRL3Q12980 569 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 IL18R1Q13478 541 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 GPR68Q15743 365 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 PROX2Q3B8N5 592 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 LAIR2Q6ISS4 152 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 TAGAPQ8N103 731 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 OR1F2PQ96R84 312 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 LMF2Q9BU23 707 aaKnown RBP16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 GTPBP2Q9BX10 602 aaKnown RBP16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 PAPOLBQ9NRJ5 636 aaKnown RBP16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 NDRG4Q9ULP0 352 aaKnown RBP16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 CDC14AQ9UNH5 594 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 ZNF443Q9Y2A4 671 aaPredicted RBP16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 HEMK1Q9Y5R4 338 aaPredicted RBP16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 A0A1B0GX78 115 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 ARRDC5A6NEK1 342 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 AGAP5A6NIR3 686 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 CLDN24A6NM45 220 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 STX11O75558 287 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 CKMT1AP12532 417 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 RPS4Y1P22090 263 aaKnown RBP16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 CBLP22681 906 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 FUT7Q11130 342 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 KEAP1Q14145 624 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 MEP1AQ16819 746 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 FGD3Q5JSP0 725 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 C1orf189Q5VU69 101 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 FIGNL1Q6PIW4 674 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 ZNF619Q8N2I2 560 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 IFI44Q8TCB0 444 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 RNF31Q96EP0 1072 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 VSTM2LQ96N03 204 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 PTCHD1Q96NR3 888 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 PRR14Q9BWN1 585 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 ING2Q9H160 280 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 FANCEQ9HB96 536 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 ZNF304Q9HCX3 659 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 MAN2C1Q9NTJ4 1040 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 KCNE5Q9UJ90 142 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 ERVK-19Q9WJR5 959 aa16.14■□□□□ 0.17
THUMPD2-201ENST00000378727 ASCC3Q8N3C0 2202 aaKnown RBP16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 IGKV3D-11A0A0A0MRZ8 115 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 AGRPO00253 132 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 IL7RP16871 459 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 RYKP34925 604 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 TPD52P55327 224 aaPredicted RBP16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 POU6F2P78424 691 aaPredicted RBP16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 SERTAD2Q14140 314 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 ANGPT1Q15389 498 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 MAPK14Q16539 360 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 YOD1Q5VVQ6 348 aaPredicted RBP16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 ZC3H14Q6PJT7 736 aaKnown RBP16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 ZNF836Q6ZNA1 936 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 PEX5LQ8IYB4 626 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 FBLIM1Q8WUP2 373 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 CNDP2Q96KP4 475 aaKnown RBP16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 DPYSL5Q9BPU6 564 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 CNPPD1Q9BV87 410 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 SYNDIG1Q9H7V2 258 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 MMACHCQ9Y4U1 282 aa16.13■□□□□ 0.17
THUMPD2-201ENST00000378727 KIAA0513O60268 411 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 KCNK2O95069 426 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 GASTP01350 101 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 CLPSP04118 112 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 IFNA16P05015 189 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 SYPP08247 313 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 POU2F1P14859 743 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 FBLP22087 321 aaKnown RBP16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 GALNSP34059 522 aa16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 RPL5P46777 297 aaKnown RBP16.12■□□□□ 0.17
THUMPD2-201ENST00000378727 PGDP52209 483 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms