RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 UCHL1P09936 223 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 SOAT1P35610 550 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 NDUFV1P49821 464 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 BEST3Q8N1M1 668 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 RSRP1Q9BUV0 290 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 ST3GAL5Q9UNP4 418 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 ICKQ9UPZ9 632 aa11.17□□□□□ -0.62
NPHP4-202ENST00000378161 A0A0D9SG52 128 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF587BE7ETH6 402 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 ONECUT3O60422 494 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 SLC34A2O95436 690 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 GIPP09681 153 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 PIRTP0C851 137 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 RAC2P15153 192 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 SLC1A2P43004 574 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 RPL38P63173 70 aaKnown RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 DHCR24Q15392 516 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 DUSP28Q4G0W2 176 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 SPIN4Q56A73 249 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 PLAG1Q6DJT9 500 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 CDK20Q8IZL9 346 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 OR8J3Q8NGG0 315 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 CCDC107Q8WV48 283 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 RTP4Q96DX8 246 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 FBXO17Q96EF6 278 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 MAPKAP1Q9BPZ7 522 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 WDR83Q9BRX9 315 aaKnown RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 ALG8Q9BVK2 526 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 DLL4Q9NR61 685 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 PCDHA9Q9Y5H5 950 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 LRP5O75197 1615 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 MEIKINA0A087WXM9 373 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 YJEFN3A6XGL0 299 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 PRRG1O14668 218 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 LPOP22079 712 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF280AP59817 542 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 KCNAB1Q14722 419 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 MON1AQ86VX9 555 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 LGI4Q8N135 537 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 C15orf54Q8N8G6 183 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 PGLYRP2Q96PD5 576 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 MCCC1Q96RQ3 725 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 ADAM2Q99965 735 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 NXF2Q9GZY0 626 aaKnown RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 OR51B6Q9H340 312 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 AGO3Q9H9G7 860 aaKnown RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 PDLIM7Q9NR12 457 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 EGFP01133 1207 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 PFKLP17858 780 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 CNR1P21554 472 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 ELAVL2Q12926 359 aaKnown RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 CBX2Q14781 532 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 ACTBL2Q562R1 376 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 MEDAGQ5VYS4 303 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 CAPN13Q6MZZ7 669 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 RPS27LQ71UM5 84 aaKnown RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 ASPGQ86U10 573 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 RANBP3LQ86VV4 465 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 NPAS3Q8IXF0 933 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF511Q8NB15 262 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 HAVCR1Q96D42 359 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 POT1Q9NUX5 634 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 C20orf202A1L168 122 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 MARCH11A6NNE9 402 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 LILRB3O75022 631 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 FKTNO75072 461 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 RPP40O75818 363 aaKnown RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 DIRAS3O95661 229 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 LGI1O95970 557 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 PMP2P02689 132 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 EPB42P16452 691 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 TRHRP34981 398 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 WNT7BP56706 349 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 CNTN1Q12860 1018 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 PRAMEF17Q5VTA0 474 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 RABEPKQ7Z6M1 372 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 PXKQ7Z7A4 578 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 B3GNT7Q8NFL0 401 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 SELENOMQ8WWX9 145 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 RNF31Q96EP0 1072 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 RIMS4Q9H426 269 aaPredicted RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 TXNL4BQ9NX01 149 aaKnown RBP11.16□□□□□ -0.62
NPHP4-202ENST00000378161 DOT1LQ8TEK3 1739 aa11.16□□□□□ -0.62
NPHP4-202ENST00000378161 A0A1W2PPQ1 181 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 TMEM218A2RU14 115 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 RFXANKO14593 260 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 UGDHO60701 494 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 GPX5O75715 221 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 HCKP08631 526 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 F7P08709 466 aaPredicted RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 C1GALT1C1LP0DN25 315 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 HLXQ14774 488 aaPredicted RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 SYPL2Q5VXT5 272 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 TANGO2Q6ICL3 276 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 PDE12Q6L8Q7 609 aaKnown RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 SPNS3Q6ZMD2 512 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 PEG10Q86TG7 708 aaKnown RBP11.15□□□□□ -0.62
NPHP4-202ENST00000378161 ZNF546Q86UE3 836 aa11.15□□□□□ -0.62
NPHP4-202ENST00000378161 FJX1Q86VR8 437 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms