RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ZNF649Q9BS31 505 aa10.25□□□□□ -0.77
BEST1-201ENST00000378043 RSPH9Q9H1X1 276 aaPredicted RBP10.25□□□□□ -0.77
BEST1-201ENST00000378043 TP63Q9H3D4 680 aaPredicted RBP10.25□□□□□ -0.77
BEST1-201ENST00000378043 N6AMT1Q9Y5N5 214 aa10.25□□□□□ -0.77
BEST1-201ENST00000378043 ATG2AQ2TAZ0 1938 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 C5orf67F2Z3F1 127 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 CSNK2A2P19784 350 aaPredicted RBP10.24□□□□□ -0.77
BEST1-201ENST00000378043 SSTR4P31391 388 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 AHRP35869 848 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 SOX9P48436 509 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 CAV3P56539 151 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 TGM3Q08188 693 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 GNA13Q14344 377 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 DUSP6Q16828 381 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 TANGO2Q6ICL3 276 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 ZNF544Q6NX49 715 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 SLC30A6Q6NXT4 461 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 CD200R1LQ6Q8B3 271 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 ZNF517Q6ZMY9 492 aaPredicted RBP10.24□□□□□ -0.77
BEST1-201ENST00000378043 QSOX2Q6ZRP7 698 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 RASSF6Q6ZTQ3 369 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 LHFPL3Q86UP9 236 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 HDDC3Q8N4P3 179 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 SIMC1Q8NDZ2 872 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 NUP43Q8NFH3 380 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 OR4Q3Q8NH05 313 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 OR52P1PQ8NH57 321 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 GNPDA2Q8TDQ7 276 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 CAPSLQ8WWF8 208 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 KAT2AQ92830 837 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 ST6GAL2Q96JF0 529 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 KCTD7Q96MP8 289 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 TIMM29Q9BSF4 260 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 MED18Q9BUE0 208 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 SARGQ9BW04 601 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 GRIP1Q9Y3R0 1128 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 STON1Q9Y6Q2 735 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 PRUNE2Q8WUY3 3088 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 SEC14L5O43304 696 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 EMC8O43402 210 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 CH25HO95992 272 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 EIF2S1P05198 315 aaKnown RBP10.24□□□□□ -0.77
BEST1-201ENST00000378043 GNSP15586 552 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 ANXA11P50995 505 aaKnown RBP10.24□□□□□ -0.77
BEST1-201ENST00000378043 PRR5P85299 388 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 ZNF155Q12901 538 aaPredicted RBP10.24□□□□□ -0.77
BEST1-201ENST00000378043 MADCAM1Q13477 382 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 TRAM2Q15035 370 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 CRTC2Q53ET0 693 aaPredicted RBP10.24□□□□□ -0.77
BEST1-201ENST00000378043 C6orf132Q5T0Z8 1188 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 FAM131AQ6UXB0 335 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 ZNF730Q6ZMV8 503 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 OR4F15Q8NGB8 312 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 DIRAS2Q96HU8 199 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 FCRL4Q96PJ5 515 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 MMP28Q9H239 520 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 MOV10Q9HCE1 1003 aaKnown RBP10.24□□□□□ -0.77
BEST1-201ENST00000378043 TOR4AQ9NXH8 423 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 ENTPD4Q9Y227 616 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 SLC17A4Q9Y2C5 497 aa10.24□□□□□ -0.77
BEST1-201ENST00000378043 PRR23AA6NEV1 266 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 FABP12A6NFH5 140 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 ALPPP05187 535 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 FGF9P31371 208 aaPredicted RBP10.23□□□□□ -0.77
BEST1-201ENST00000378043 MPIP34949 423 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 AVPR1BP47901 424 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 PDX1P52945 283 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 FZD5Q13467 585 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 ASAH1Q13510 395 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 ZNF628Q5EBL2 1059 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 AADACL4Q5VUY2 407 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 ZNF425Q6IV72 752 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 XKRXQ6PP77 449 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 VITQ6UXI7 678 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 HSDL2Q6YN16 418 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 POGLUT1Q8NBL1 392 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 KCT2Q8NC54 265 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 MOAP1Q96BY2 351 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 SLC35A4Q96G79 324 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 ISYNA1Q9NPH2 558 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 PHPT1Q9NRX4 125 aaPredicted RBP10.23□□□□□ -0.77
BEST1-201ENST00000378043 GIMAP4Q9NUV9 329 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 SHISA3A0PJX4 238 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 MEIOCA2RUB1 952 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 SLC30A4O14863 429 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 TFECO14948 347 aaPredicted RBP10.23□□□□□ -0.77
BEST1-201ENST00000378043 PLA2G10O15496 165 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 KLF4O43474 513 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 ASGR2P07307 311 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 TCEA1P23193 301 aaKnown RBP10.23□□□□□ -0.77
BEST1-201ENST00000378043 TEAD1P28347 426 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 GABRA5P31644 462 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 SLC1A3P43003 542 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 ERVK-21P61565 698 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 SCN1BQ07699 218 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 ST3GAL3Q11203 375 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 RUNX3Q13761 415 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 LRRC32Q14392 662 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 KRT33BQ14525 404 aa10.23□□□□□ -0.77
BEST1-201ENST00000378043 INSL4Q14641 139 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms