RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 AGKQ53H12 422 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 FUNDC1Q8IVP5 155 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 ZFP62Q8NB50 900 aaPredicted RBP12.17□□□□□ -0.46
CKAP2-202ENST00000378034 SLC16A11Q8NCK7 471 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 TSPEARQ8WU66 669 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 FAR1Q8WVX9 515 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 C16orf58Q96GQ5 468 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 FRMD6Q96NE9 622 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 SERHLQ9NQF3 203 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 ASF1BQ9NVP2 202 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 CCDC167Q9P0B6 97 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 NUP214P35658 2090 aaPredicted RBP12.17□□□□□ -0.46
CKAP2-202ENST00000378034 GMNCA6NCL1 334 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 CCDC154A6NI56 674 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 RFXANKO14593 260 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 UGT2B11O75310 529 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 SNX4O95219 450 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 IL33O95760 270 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 MAGEA8P43361 318 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 SAXO2Q658L1 398 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 ZNF324BQ6AW86 544 aaPredicted RBP12.16□□□□□ -0.46
CKAP2-202ENST00000378034 WDR53Q7Z5U6 358 aaPredicted RBP12.16□□□□□ -0.46
CKAP2-202ENST00000378034 OR2M7Q8NG81 312 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 OR4N2Q8NGD1 307 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 OR5M3Q8NGP4 307 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 OR5AK3PQ8NH89 298 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 MIPOL1Q8TD10 442 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 ADAMTS15Q8TE58 950 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 SPDL1Q96EA4 605 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 NEURL3Q96EH8 262 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 SLC35G5Q96KT7 338 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 PHF12Q96QT6 1004 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 ADOQ96SZ5 270 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 SLC35A5Q9BS91 424 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 BTBD2Q9BX70 525 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 ANGPTL4Q9BY76 406 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 DEPPQ9NTK1 212 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 NTNG1Q9Y2I2 539 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 HS6ST1O60243 411 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 AGR2O95994 175 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 MATN1P21941 496 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 ADSLP30566 484 aaPredicted RBP12.16□□□□□ -0.46
CKAP2-202ENST00000378034 CASP3P42574 277 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 MAN2A2P49641 1150 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 GNGT1P63211 74 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 DUSP5Q16690 384 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 PRR30Q53SZ7 412 aaPredicted RBP12.16□□□□□ -0.46
CKAP2-202ENST00000378034 SLC30A6Q6NXT4 461 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 BNC2Q6ZN30 1099 aaPredicted RBP12.16□□□□□ -0.46
CKAP2-202ENST00000378034 ZNF621Q6ZSS3 439 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 COX18Q8N8Q8 333 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 FAM110BQ8TC76 370 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 C10orf82Q8WW14 230 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 NR4A3Q92570 626 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 JADE3Q92613 823 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 VPS33AQ96AX1 596 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 MIB2Q96AX9 1013 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 NTNG2Q96CW9 530 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 INPP5KQ9BT40 448 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 OLAHQ9NV23 265 aa12.16□□□□□ -0.46
CKAP2-202ENST00000378034 SMG1Q96Q15 3661 aaKnown RBP12.16□□□□□ -0.46
CKAP2-202ENST00000378034 A0A1W2PP18 115 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 NR5A2O00482 541 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 ASNA1O43681 348 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 ANP32DO95626 131 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 KRT75O95678 551 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 CHI3L1P36222 383 aaPredicted RBP12.15□□□□□ -0.46
CKAP2-202ENST00000378034 ANXA11P50995 505 aaKnown RBP12.15□□□□□ -0.46
CKAP2-202ENST00000378034 SEC24CP53992 1094 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 GYS2P54840 703 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 GPR85P60893 370 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 KCNJ2P63252 427 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 POU6F2P78424 691 aaPredicted RBP12.15□□□□□ -0.46
CKAP2-202ENST00000378034 ALDH6A1Q02252 535 aaKnown RBP12.15□□□□□ -0.46
CKAP2-202ENST00000378034 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.15□□□□□ -0.46
CKAP2-202ENST00000378034 HYAL4Q2M3T9 481 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 SPATA21Q7Z572 469 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 CPLX4Q7Z7G2 160 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 PIK3R3Q92569 461 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 GTF2H4Q92759 462 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 RMND5BQ96G75 393 aaPredicted RBP12.15□□□□□ -0.46
CKAP2-202ENST00000378034 YIPF4Q9BSR8 244 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 G6PC3Q9BUM1 346 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 METTL7AQ9H8H3 244 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 IL1RL2Q9HB29 575 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 PROK2Q9HC23 129 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 SLC52A3Q9NQ40 469 aa12.15□□□□□ -0.46
CKAP2-202ENST00000378034 BOKQ9UMX3 212 aaPredicted RBP12.15□□□□□ -0.46
CKAP2-202ENST00000378034 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.15□□□□□ -0.46
CKAP2-202ENST00000378034 EML6Q6ZMW3 1958 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 GXYLT2A0PJZ3 443 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 ACOT7O00154 380 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 KCNK2O95069 426 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 AK1P00568 194 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 EDN3P14138 238 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 ZNF24P17028 368 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 CDKN2CP42773 168 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 FOXK1P85037 733 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 PMP22Q01453 160 aa12.14□□□□□ -0.47
CKAP2-202ENST00000378034 PACS2Q86VP3 889 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms