RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 DPPA4Q7L190 304 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 CALHM3Q86XJ0 350 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 MFSD4AQ8N468 514 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 TMEM145Q8NBT3 493 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 OR52I1Q8NGK6 324 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 HCAR2Q8TDS4 363 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 IRF7Q92985 503 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ELP4Q96EB1 424 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 NIPSNAP1Q9BPW8 284 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 C19orf43Q9BQ61 176 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 MVB12BQ9H7P6 319 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 Q9N2J8 555 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ACSS1Q9NUB1 689 aaPredicted RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 GRHPRQ9UBQ7 328 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 GXYLT2A0PJZ3 443 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 CSF1P09603 554 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 IL12BP29460 328 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 XCR1P46094 333 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 TAGLNQ01995 201 aaKnown RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 PRKCZQ05513 592 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 TSPAN31Q12999 210 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 RTP2Q5QGT7 225 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 MPP7Q5T2T1 576 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 CNKSR3Q6P9H4 555 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF551Q7Z340 670 aaPredicted RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ANGPTL6Q8NI99 470 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 TRMT2BQ96GJ1 504 aaKnown RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 C1QTNF2Q9BXJ5 285 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 TEX10Q9NXF1 929 aaPredicted RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ADAM29Q9UKF5 820 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 PPT2Q9UMR5 302 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 CDC40O60508 579 aaKnown RBP eCLIP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF806P0C7X5 589 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 CPEP16870 476 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ELAVL4P26378 380 aaKnown RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ALG1LQ6GMV1 187 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 MEPCEQ7L2J0 689 aaKnown RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 WDR53Q7Z5U6 358 aaPredicted RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 TTC9BQ8N6N2 239 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 CLIP3Q96DZ5 547 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF419Q96HQ0 510 aaPredicted RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 SAMD8Q96LT4 415 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 TSNAXQ99598 290 aaKnown RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 SYT17Q9BSW7 474 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 DNAJC5Q9H3Z4 198 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 TDP1Q9NUW8 608 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ASB6Q9NWX5 421 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 GLTPQ9NZD2 209 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 TOXO94900 526 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 IL32P24001 234 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 GRK5P34947 590 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 RPS19P39019 145 aaKnown RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 HTR3AP46098 478 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 PRLHRP49683 370 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 RNF144AP50876 292 aaPredicted RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ACTBP60709 375 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ACTG1P63261 375 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 LDLRAD1Q5T700 205 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 FAM122CQ6P4D5 195 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 VITQ6UXI7 678 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 TMEM179BQ7Z7N9 219 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 SLC35F2Q8IXU6 374 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 CELF5Q8N6W0 485 aaKnown RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 OR56B4Q8NH76 319 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ELMOD3Q96FG2 381 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 SLC6A16Q9GZN6 736 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 SLIRPQ9GZT3 109 aaKnown RBP8.29□□□□□ -1.08
PCDH9-202ENST00000377865 PDFQ9HBH1 243 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 BABAM2Q9NXR7 383 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 TMEM98Q9Y2Y6 226 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 TMEM14AQ9Y6G1 99 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ACOT7O00154 380 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 PCMT1P22061 227 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 SLC19A1P41440 591 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 FRKP42685 505 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ARHGAP19Q14CB8 494 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 PLEKHN1Q494U1 663 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 CD276Q5ZPR3 534 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 SFRP4Q6FHJ7 346 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 NUP54Q7Z3B4 507 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 TCTE3Q8IZS6 198 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 HORMAD2Q8N7B1 307 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 HMGCLL1Q8TB92 370 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ACOT11Q8WXI4 607 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 DGAT2Q96PD7 388 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 MS4A4EQ96PG1 132 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 MED18Q9BUE0 208 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 G6PC3Q9BUM1 346 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 RBCK1Q9BYM8 510 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 B3GNT4Q9C0J1 378 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 INIPQ9NRY2 104 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 RXFP3Q9NSD7 469 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 SNX11Q9Y5W9 270 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 HOXC11O43248 304 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 FURINP09958 794 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF20P17024 532 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 CD70P32970 193 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 EVI2BP34910 448 aa8.28□□□□□ -1.08
PCDH9-202ENST00000377865 RPS15AP62244 130 aaKnown RBP8.28□□□□□ -1.08
PCDH9-202ENST00000377865 GRIN2CQ14957 1233 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms