RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 PAQR5Q9NXK6 330 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PISDQ9UG56 409 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PRKAR2AP13861 404 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 NELFEP18615 380 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 STK19P49842 368 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 DUSP3P51452 185 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 COL13A1Q5TAT6 717 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 C1orf94Q6P1W5 598 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ERN2Q76MJ5 926 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ARL14EPQ8N8R7 260 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PRRC1Q96M27 445 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ATF6BQ99941 703 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 TREX2Q9BQ50 279 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 RHOFQ9HBH0 211 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF337Q9Y3M9 751 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 MMACHCQ9Y4U1 282 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 MAT2AP31153 395 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ERVPABLB-1P60509 514 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 NXF2Q9GZY0 626 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 SLC35E2P0CK97 266 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 GATMP50440 423 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 AIMP2Q13155 320 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PSRC1Q6PGN9 363 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 MARC2Q969Z3 335 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 MYOZ1Q9NP98 299 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 FBXL3Q9UKT7 428 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 FAM208AQ9UK61 1670 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PRLHRP49683 370 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 TNK1Q13470 666 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 OR4K5Q8NGD3 323 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 BRIX1Q8TDN6 353 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PWWP2AQ96N64 755 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 B4DEV8 164 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 SLC33A1O00400 549 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ADAM10O14672 748 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 TP53I11O14683 189 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 LCMT2O60294 686 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 LGALSLQ3ZCW2 172 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CMTM1Q8IZ96 169 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 OPA3Q9H6K4 179 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 BIN3Q9NQY0 253 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 KCNIP2Q9NS61 270 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 RXFP3Q9NSD7 469 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CHRNA6Q15825 494 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 EOGTQ5NDL2 527 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ANKRD16Q6P6B7 361 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PLXDC1Q8IUK5 500 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 EFCAB3Q8N7B9 438 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 IP6K3Q96PC2 410 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 OR51B5Q9H339 312 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 TAS2R5Q9NYW4 299 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 GPR137BO60478 399 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CDRT1O95170 752 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 EIF4EBP2Q13542 120 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ELOCQ15369 112 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CCDC190Q86UF4 302 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CEP41Q9BYV8 373 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 SLC7A5P2Q9GIP4 190 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PLEKHA2Q9HB19 425 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF222Q9UK12 451 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 NXT1Q9UKK6 140 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ADAMTS4O75173 837 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CDKN2DP55273 166 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 EGR3Q06889 387 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 GALEQ14376 348 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ELFN2Q5R3F8 820 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 FAM151BQ6UXP7 276 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 RBMS3Q6XE24 437 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 RASGRP3Q8IV61 690 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PIAS3Q9Y6X2 628 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PSMA6P60900 246 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 SURF2Q15527 256 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PCK2Q16822 640 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 SMARCD3Q6STE5 483 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 OR4E2Q8NGC2 313 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 TMEM43Q9BTV4 400 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ADAM33Q9BZ11 813 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF534Q76KX8 674 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 IQCHQ86VS3 1027 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 WRAP53Q9BUR4 548 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CHST6Q9GZX3 395 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PIF1Q9H611 641 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 MRPS30Q9NP92 439 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 L7N2F9 121 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 TBX1O43435 398 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 HNRNPA1L2Q32P51 320 aaKnown RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 FAM111BQ6SJ93 734 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ABHD12BQ7Z5M8 362 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 CEACAM19Q7Z692 300 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 OR8H3Q8N146 312 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ECHDC3Q96DC8 303 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 KLHL5Q96PQ7 755 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 PCDHB10Q9UN67 800 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.67□□□□□ -1.66
PCDH9-201ENST00000377861 ZAR1LA6NP61 321 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 GJA1P17302 382 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 RAB8AP61006 207 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 IGFN1Q86VF2 1251 aa4.67□□□□□ -1.66
PCDH9-201ENST00000377861 SPHK2Q9NRA0 654 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms