RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 IL17RCQ8NAC3 791 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 PROKR2Q8NFJ6 384 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 TTLQ8NG68 377 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 OR11H7Q8NGC8 314 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 OR52H1Q8NGJ2 320 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 ZNF296Q8WUU4 475 aaPredicted RBP13.02□□□□□ -0.33
SF1-205ENST00000377394 UCN3Q969E3 161 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 OTUB2Q96DC9 234 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 LRRC3BQ96PB8 259 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 TREX2Q9BQ50 279 aaPredicted RBP13.02□□□□□ -0.33
SF1-205ENST00000377394 PPP1R3EQ9H7J1 279 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 SLC28A3Q9HAS3 691 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 NOTCH4Q99466 2003 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 NDUFA2O43678 99 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 TMPRSS11DO60235 418 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 FGF19O95750 216 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 PRNPP04156 253 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 PIN1Q13526 163 aaPredicted RBP13.02□□□□□ -0.33
SF1-205ENST00000377394 IL18Q14116 193 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 TCEAL5Q5H9L2 206 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 BCL2L15Q5TBC7 163 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 ZNF57Q68EA5 555 aaPredicted RBP13.02□□□□□ -0.33
SF1-205ENST00000377394 CHMP1BQ7LBR1 199 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 C17orf64Q86WR6 236 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 LINC00518Q8N0U6 118 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 IQCF1Q8N6M8 205 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 ZNF655Q8N720 491 aaPredicted RBP13.02□□□□□ -0.33
SF1-205ENST00000377394 BMPERQ8N8U9 685 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 OR52P1PQ8NH57 321 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 EXOSC8Q96B26 276 aaKnown RBP13.02□□□□□ -0.33
SF1-205ENST00000377394 SIPA1Q96FS4 1042 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 TEFMQ96QE5 360 aaKnown RBP13.02□□□□□ -0.33
SF1-205ENST00000377394 WASH6PQ9NQA3 447 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 CPNE7Q9UBL6 633 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 CDH10Q9Y6N8 788 aa13.02□□□□□ -0.33
SF1-205ENST00000377394 NUP210Q8TEM1 1887 aaPredicted RBP13.01□□□□□ -0.33
SF1-205ENST00000377394 PRKYO43930 277 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 RRASP10301 218 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 CTBP2P56545 445 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 CNTN1Q12860 1018 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 MLLT11Q13015 90 aaPredicted RBP13.01□□□□□ -0.33
SF1-205ENST00000377394 SYPL1Q16563 259 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 DCUN1D3Q8IWE4 304 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 GPALPP1Q8IXQ4 340 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 RBPMSQ93062 196 aaKnown RBP13.01□□□□□ -0.33
SF1-205ENST00000377394 NXPE3Q969Y0 559 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 SORCS2Q96PQ0 1159 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 RBP7Q96R05 134 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 KATNB1Q9BVA0 655 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 ANKRA2Q9H9E1 313 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 PELI2Q9HAT8 420 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 TEX10Q9NXF1 929 aaPredicted RBP13.01□□□□□ -0.33
SF1-205ENST00000377394 RDH8Q9NYR8 311 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 KCMF1Q9P0J7 381 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 SEC14L3Q9UDX4 400 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 SLC23A2Q9UGH3 650 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 ING4Q9UNL4 249 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 FEZF1A0PJY2 475 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 VEGFDO43915 354 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 SH3BP5O60239 455 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 LZTS3O60299 673 aaPredicted RBP13.01□□□□□ -0.33
SF1-205ENST00000377394 NCR1O76036 304 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 HRGP04196 525 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 CSF2RAP15509 400 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 CXCL3P19876 107 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 ETV1P50549 477 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 ZNF81P51508 661 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 PRMT2P55345 433 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 ST8SIA6P61647 398 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 ANGPT1Q15389 498 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 DEFB115Q30KQ5 88 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 C9orf64Q5T6V5 341 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 PODNL1Q6PEZ8 512 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 TRILQ7L0X0 811 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 UBE3DQ7Z6J8 389 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 TRIM69Q86WT6 500 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 TBC1D19Q8N5T2 526 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 FGF11Q92914 225 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 ZNF607Q96SK3 696 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 AIF1LQ9BQI0 150 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 TVP23BQ9NYZ1 205 aa13.01□□□□□ -0.33
SF1-205ENST00000377394 PRRT4C9JH25 899 aa13□□□□□ -0.33
SF1-205ENST00000377394 SLC28A2O43868 658 aa13□□□□□ -0.33
SF1-205ENST00000377394 HCN1O60741 890 aa13□□□□□ -0.33
SF1-205ENST00000377394 IL1AP01583 271 aa13□□□□□ -0.33
SF1-205ENST00000377394 OR12D1P0DN82 309 aa13□□□□□ -0.33
SF1-205ENST00000377394 LSM11P83369 360 aaKnown RBP eCLIP13□□□□□ -0.33
SF1-205ENST00000377394 TUSC1Q2TAM9 212 aa13□□□□□ -0.33
SF1-205ENST00000377394 GHDCQ8N2G8 530 aa13□□□□□ -0.33
SF1-205ENST00000377394 FAM26EQ8N5C1 309 aa13□□□□□ -0.33
SF1-205ENST00000377394 AMER3Q8N944 861 aa13□□□□□ -0.33
SF1-205ENST00000377394 TFGQ92734 400 aaPredicted RBP13□□□□□ -0.33
SF1-205ENST00000377394 NELL2Q99435 816 aa13□□□□□ -0.33
SF1-205ENST00000377394 TMEM43Q9BTV4 400 aa13□□□□□ -0.33
SF1-205ENST00000377394 MENTQ9BUN1 341 aa13□□□□□ -0.33
SF1-205ENST00000377394 MED28Q9H204 178 aa13□□□□□ -0.33
SF1-205ENST00000377394 MAN2C1Q9NTJ4 1040 aa13□□□□□ -0.33
SF1-205ENST00000377394 SLCO1C1Q9NYB5 712 aa13□□□□□ -0.33
SF1-205ENST00000377394 HCN2Q9UL51 889 aa13□□□□□ -0.33
SF1-205ENST00000377394 COL4A3Q01955 1670 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms