RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 C6orf132Q5T0Z8 1188 aa17■□□□□ 0.31
SF1-203ENST00000377387 FBXL6Q8N531 539 aa17■□□□□ 0.31
SF1-203ENST00000377387 SPPL3Q8TCT6 385 aa17■□□□□ 0.31
SF1-203ENST00000377387 SLC38A2Q96QD8 506 aa17■□□□□ 0.31
SF1-203ENST00000377387 SERGEFQ9UGK8 458 aa17■□□□□ 0.31
SF1-203ENST00000377387 SLC27A6Q9Y2P4 619 aa17■□□□□ 0.31
SF1-203ENST00000377387 GSTK1Q9Y2Q3 226 aa17■□□□□ 0.31
SF1-203ENST00000377387 SF3B6Q9Y3B4 125 aaKnown RBP17■□□□□ 0.31
SF1-203ENST00000377387 COL4A3Q01955 1670 aa17■□□□□ 0.31
SF1-203ENST00000377387 F5P12259 2224 aa17■□□□□ 0.31
SF1-203ENST00000377387 POLR1CO15160 346 aaPredicted RBP17■□□□□ 0.31
SF1-203ENST00000377387 UBXN7O94888 489 aa17■□□□□ 0.31
SF1-203ENST00000377387 RAB25P57735 213 aa17■□□□□ 0.31
SF1-203ENST00000377387 TGM3Q08188 693 aa17■□□□□ 0.31
SF1-203ENST00000377387 IL18Q14116 193 aa17■□□□□ 0.31
SF1-203ENST00000377387 C3orf38Q5JPI3 329 aa17■□□□□ 0.31
SF1-203ENST00000377387 ENTPD8Q5MY95 495 aa17■□□□□ 0.31
SF1-203ENST00000377387 CNIH2Q6PI25 160 aa17■□□□□ 0.31
SF1-203ENST00000377387 C16orf62Q7Z3J2 963 aa17■□□□□ 0.31
SF1-203ENST00000377387 MARCH9Q86YJ5 346 aa17■□□□□ 0.31
SF1-203ENST00000377387 NUP43Q8NFH3 380 aa17■□□□□ 0.31
SF1-203ENST00000377387 PCBD2Q9H0N5 130 aa17■□□□□ 0.31
SF1-203ENST00000377387 PRSS16Q9NQE7 514 aa17■□□□□ 0.31
SF1-203ENST00000377387 SPHK1Q9NYA1 384 aa17■□□□□ 0.31
SF1-203ENST00000377387 TRBV23OR9-2A0A075B6M9 112 aa17■□□□□ 0.31
SF1-203ENST00000377387 A0A0B4J293 547 aa17■□□□□ 0.31
SF1-203ENST00000377387 SHISA3A0PJX4 238 aa17■□□□□ 0.31
SF1-203ENST00000377387 ZC3H12DA2A288 527 aaKnown RBP17■□□□□ 0.31
SF1-203ENST00000377387 DRD2P14416 443 aa17■□□□□ 0.31
SF1-203ENST00000377387 FUT1P19526 365 aa17■□□□□ 0.31
SF1-203ENST00000377387 HIST1H1TP22492 207 aaPredicted RBP17■□□□□ 0.31
SF1-203ENST00000377387 BNC1Q01954 994 aa17■□□□□ 0.31
SF1-203ENST00000377387 RAB40BQ12829 278 aa17■□□□□ 0.31
SF1-203ENST00000377387 CAMK1Q14012 370 aa17■□□□□ 0.31
SF1-203ENST00000377387 NDUFA9Q16795 377 aa17■□□□□ 0.31
SF1-203ENST00000377387 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17■□□□□ 0.311e-8■■□□□ 14.5
SF1-203ENST00000377387 OR4N5Q8IXE1 308 aa17■□□□□ 0.31
SF1-203ENST00000377387 NRMQ8IXM6 262 aa17■□□□□ 0.31
SF1-203ENST00000377387 CLDN22Q8N7P3 220 aa17■□□□□ 0.31
SF1-203ENST00000377387 MS4A6EQ96DS6 147 aa17■□□□□ 0.31
SF1-203ENST00000377387 RNF31Q96EP0 1072 aa17■□□□□ 0.31
SF1-203ENST00000377387 MSLNLQ96KJ4 702 aa17■□□□□ 0.31
SF1-203ENST00000377387 GPSM3Q9Y4H4 160 aa17■□□□□ 0.31
SF1-203ENST00000377387 GON4LQ3T8J9 2241 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.99■□□□□ 0.31
SF1-203ENST00000377387 CARNS1A5YM72 827 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 C1QTNF3-AMACRE9PGA6 284 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 ALPPP05187 535 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 EFNB1P98172 346 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 HSDL2Q6YN16 418 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 Q8N402 240 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 OR4Q3Q8NH05 313 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 SMG7Q92540 1137 aaKnown RBP16.99■□□□□ 0.31
SF1-203ENST00000377387 SLC38A1Q9H2H9 487 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 INSL6Q9Y581 213 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 A0A1B0GVC2 190 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 A6NIN4 97 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 CLEC3AO75596 197 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 SLC2A2P11168 524 aaPredicted RBP16.99■□□□□ 0.31
SF1-203ENST00000377387 SLC1A3P43003 542 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 RGS8P57771 180 aaPredicted RBP16.99■□□□□ 0.31
SF1-203ENST00000377387 SNRPNP63162 240 aaKnown RBP16.99■□□□□ 0.31
SF1-203ENST00000377387 FAM78AQ5JUQ0 283 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 SMARCD3Q6STE5 483 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 ASCC1Q8N9N2 400 aaKnown RBP16.99■□□□□ 0.31
SF1-203ENST00000377387 C19orf18Q8NEA5 215 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 GNPDA2Q8TDQ7 276 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 TMEM255BQ8WV15 326 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 FGF11Q92914 225 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 FRMD6Q96NE9 622 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 WDR26Q9H7D7 661 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 NPAP1Q9NZP6 1156 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 ASB4Q9Y574 426 aa16.99■□□□□ 0.31
SF1-203ENST00000377387 NUP210Q8TEM1 1887 aaPredicted RBP16.98■□□□□ 0.31
SF1-203ENST00000377387 KIF26AQ9ULI4 1882 aaPredicted RBP16.98■□□□□ 0.31
SF1-203ENST00000377387 SOCS6O14544 535 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 HRO43593 1189 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 GSTM3P21266 225 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 ATP5A1P25705 553 aaKnown RBP16.98■□□□□ 0.31
SF1-203ENST00000377387 MAT2AP31153 395 aaKnown RBP16.98■□□□□ 0.31
SF1-203ENST00000377387 NDUFA5Q16718 116 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 SLC35F1Q5T1Q4 408 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 TRIQKQ629K1 86 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 CD300LDQ6UXZ3 194 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 ADAMTSL4Q6UY14 1074 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 PLEKHM3Q6ZWE6 761 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 KLBQ86Z14 1044 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 RAB42Q8N4Z0 105 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 GANCQ8TET4 914 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 BADQ92934 168 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 ZNF707Q96C28 371 aaPredicted RBP16.98■□□□□ 0.31
SF1-203ENST00000377387 SECISBP2Q96T21 854 aaKnown RBP16.98■□□□□ 0.31
SF1-203ENST00000377387 MED20Q9H944 212 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 SLC6A20Q9NP91 592 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 PRDM7Q9NQW5 492 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 TAS2R7Q9NYW3 318 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 NLKQ9UBE8 527 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 HMX3A6NHT5 357 aa16.98■□□□□ 0.31
SF1-203ENST00000377387 CSNK2A2P19784 350 aaPredicted RBP16.98■□□□□ 0.31
SF1-203ENST00000377387 DRD3P35462 400 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms