RNA–Protein interactions for RNA: ENST00000377294.2

ZKSCAN4-201, Transcript of zinc finger with KRAB and SCAN domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN4, Length 2,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN4-201ENST00000377294 SLC35B4Q969S0 331 aa13.59□□□□□ -0.23
ZKSCAN4-201ENST00000377294 ZNF764Q96H86 408 aaPredicted RBP13.59□□□□□ -0.23
ZKSCAN4-201ENST00000377294 NELL2Q99435 816 aa13.59□□□□□ -0.23
ZKSCAN4-201ENST00000377294 SLC30A2Q9BRI3 323 aa13.59□□□□□ -0.23
ZKSCAN4-201ENST00000377294 SP140LQ9H930 580 aa13.59□□□□□ -0.23
ZKSCAN4-201ENST00000377294 GIMAP4Q9NUV9 329 aa13.59□□□□□ -0.23
ZKSCAN4-201ENST00000377294 TXNL4BQ9NX01 149 aaKnown RBP13.59□□□□□ -0.23
ZKSCAN4-201ENST00000377294 TBC1D24Q9ULP9 559 aa13.59□□□□□ -0.23
ZKSCAN4-201ENST00000377294 STUB1Q9UNE7 303 aa13.59□□□□□ -0.23
ZKSCAN4-201ENST00000377294 MRPS2Q9Y399 296 aaKnown RBP13.59□□□□□ -0.23
ZKSCAN4-201ENST00000377294 KNL1Q8NG31 2342 aa13.59□□□□□ -0.23
ZKSCAN4-201ENST00000377294 TICRRQ7Z2Z1 1910 aa13.59□□□□□ -0.23
ZKSCAN4-201ENST00000377294 A0A0G2JPF8 293 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 ZC3H12DA2A288 527 aaKnown RBP13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 SAGE2PA6NJ88 616 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 HNRNPCL2B2RXH8 293 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 HNRNPCL3B7ZW38 293 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 CTSVO60911 334 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 RAB36O95755 333 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 MSL3P1P0C860 447 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 HNRNPCL4P0DMR1 293 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 CMPK1P30085 196 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 SSTR4P31391 388 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 TMED10P49755 219 aaKnown RBP13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 EFNB1P98172 346 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 TGM3Q08188 693 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 CDC20Q12834 499 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 TIMM50Q3ZCQ8 353 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 ENTPD8Q5MY95 495 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 TUBA3EQ6PEY2 450 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 TMEM64Q6YI46 380 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 DIO2Q92813 273 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 OTULINQ96BN8 352 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 PINK1Q9BXM7 581 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 TMEM168Q9H0V1 697 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 MARCH7Q9H992 704 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 TIGARQ9NQ88 270 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 FBXO34Q9NWN3 711 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 A3GALT2U3KPV4 340 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 V9GYH0 126 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 ARHGEF17Q96PE2 2063 aaPredicted RBP13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 HYKKA2RU49 373 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 SYNDIG1LA6NDD5 238 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 CACNB4O00305 520 aaPredicted RBP13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 UBXN7O94888 489 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 PVRP15151 417 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 MPIP34949 423 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 PRR5P85299 388 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 HNRNPA0Q13151 305 aaKnown RBP13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 SRSF5Q13243 272 aaKnown RBP13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 ZNF79Q15937 498 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 ITPRIPL2Q3MIP1 535 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 GALNT12Q8IXK2 581 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 NRMQ8IXM6 262 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 PROKR2Q8NFJ6 384 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 OR56A1Q8NGH5 318 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 TEX47Q8TBZ9 253 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 C10orf90Q96M02 699 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 ZNF780BQ9Y6R6 833 aa13.58□□□□□ -0.24
ZKSCAN4-201ENST00000377294 LOC105369274A0A096LPK9 316 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 LOC102723532A0A0G2JNH3 316 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 ISPDA4D126 451 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 FAM183AA6NL82 134 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 ZNF670-ZNF695F2Z2N8 137 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 CDC42EP2O14613 210 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 DVL2O14641 736 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 HYAL3O43820 417 aaPredicted RBP13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 NR2F6P10588 404 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 PRG2P13727 222 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 DDX5P17844 614 aaKnown RBP13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 AHRP35869 848 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 NR4A2P43354 598 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 OMPP47874 163 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 SMSP52788 366 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 NXNL2Q5VZ03 156 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 FBXO42Q6P3S6 717 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 FRRS1Q6ZNA5 592 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 MTSS1LQ765P7 747 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 PAQR7Q86WK9 346 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 OR4N4Q8N0Y3 316 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 NLGN4YQ8NFZ3 816 aaPredicted RBP13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 OR52P1PQ8NH57 321 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 TMEM163Q8TC26 289 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 SFXN5Q8TD22 340 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 ARHGDIGQ99819 225 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 CPNE5Q9HCH3 593 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 ZSCAN32Q9NX65 697 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 SLC13A4Q9UKG4 626 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 DIMT1Q9UNQ2 313 aaKnown RBP13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 CSNK1G3Q9Y6M4 447 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 A0A1W2PQF6 199 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 GPR89AB7ZAQ6 455 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 LDB3O75112 727 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 EIF2S1P05198 315 aaKnown RBP13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 CCNYL3P0C7X3 344 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 GKN3PP0CG01 181 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 GPR89BP0CG08 455 aa13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 POLR2CP19387 275 aaPredicted RBP13.57□□□□□ -0.24
ZKSCAN4-201ENST00000377294 SDC2P34741 201 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms