RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 GALR3O60755 368 aaPredicted RBP20.26■□□□□ 0.83
RNF39-202ENST00000376751 CNOT3O75175 753 aaKnown RBP20.26■□□□□ 0.83
RNF39-202ENST00000376751 THY1P04216 161 aa20.26■□□□□ 0.83
RNF39-202ENST00000376751 HSMCR30P0CW71 290 aa20.26■□□□□ 0.83
RNF39-202ENST00000376751 IGFBP4P22692 258 aa20.26■□□□□ 0.83
RNF39-202ENST00000376751 RGS6P49758 472 aa20.26■□□□□ 0.83
RNF39-202ENST00000376751 CLK1P49759 484 aaKnown RBP20.26■□□□□ 0.83
RNF39-202ENST00000376751 DEFB110Q30KQ9 67 aa20.26■□□□□ 0.83
RNF39-202ENST00000376751 PUS10Q3MIT2 529 aaKnown RBP20.26■□□□□ 0.83
RNF39-202ENST00000376751 EXOSC6Q5RKV6 272 aaKnown RBP20.26■□□□□ 0.83
RNF39-202ENST00000376751 ZNF836Q6ZNA1 936 aa20.26■□□□□ 0.83
RNF39-202ENST00000376751 PRICKLE2Q7Z3G6 844 aa20.26■□□□□ 0.83
RNF39-202ENST00000376751 TMCO5AQ8N6Q1 288 aa20.26■□□□□ 0.83
RNF39-202ENST00000376751 OR6Q1Q8NGQ2 317 aa20.26■□□□□ 0.83
RNF39-202ENST00000376751 RNF167Q9H6Y7 350 aa20.26■□□□□ 0.83
RNF39-202ENST00000376751 PALMDQ9NP74 551 aa20.26■□□□□ 0.83
RNF39-202ENST00000376751 FAM170BA6NMN3 283 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 OR5K4A6NMS3 321 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 CLDN25C9JDP6 229 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 CTSEP14091 401 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 ST6GAL1P15907 406 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 RGS8P57771 180 aaPredicted RBP20.25■□□□□ 0.83
RNF39-202ENST00000376751 HHEXQ03014 270 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 TRAM2Q15035 370 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 ARHGAP11BQ3KRB8 267 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 MFSD4BQ5TF39 518 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 OR8D4Q8NGM9 314 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 FGF11Q92914 225 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 LRRC61Q9BV99 259 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 TSSK6Q9BXA6 273 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 DSN1Q9H410 356 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 ADAP2Q9NPF8 381 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 CNIH4Q9P003 139 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 WDR45Q9Y484 360 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 A0A1W2PPC4 97 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 KRBA1A5PL33 1030 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 B4DGG1 531 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 CCNYL3P0C7X3 344 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 DBTP11182 482 aaKnown RBP20.25■□□□□ 0.83
RNF39-202ENST00000376751 CHRNB1P11230 501 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 BMP4P12644 408 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 GIPRP48546 466 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 PCYT1AP49585 367 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 LIMK1P53667 647 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 CDK5Q00535 292 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 ZNF846Q147U1 533 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 OCLNQ16625 522 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 NKAIN4Q8IVV8 208 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 ZDHHC1Q8WTX9 485 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 Q96MT0 163 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 SDF2Q99470 211 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 POLDIP3Q9BY77 421 aaKnown RBP20.25■□□□□ 0.83
RNF39-202ENST00000376751 TTYH1Q9H313 450 aaPredicted RBP20.25■□□□□ 0.83
RNF39-202ENST00000376751 FBXO8Q9NRD0 319 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 CLEC2DQ9UHP7 191 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 POMT2Q9UKY4 750 aa20.25■□□□□ 0.83
RNF39-202ENST00000376751 LSM2Q9Y333 95 aaKnown RBP20.25■□□□□ 0.83
RNF39-202ENST00000376751 ANKRD33BA6NCL7 494 aa20.24■□□□□ 0.83
RNF39-202ENST00000376751 SGK494L7N484 410 aa20.24■□□□□ 0.83
RNF39-202ENST00000376751 AGR2O95994 175 aa20.24■□□□□ 0.83
RNF39-202ENST00000376751 ATP1B1P05026 303 aa20.24■□□□□ 0.83
RNF39-202ENST00000376751 SPTBP11277 2137 aa20.24■□□□□ 0.83
RNF39-202ENST00000376751 UGT2B10P36537 528 aa20.24■□□□□ 0.83
RNF39-202ENST00000376751 MAP4K2Q12851 820 aa20.24■□□□□ 0.83
RNF39-202ENST00000376751 MED22Q15528 200 aa20.24■□□□□ 0.83
RNF39-202ENST00000376751 TSTQ16762 297 aaKnown RBP20.24■□□□□ 0.83
RNF39-202ENST00000376751 OOSP2Q86WS3 158 aa20.24■□□□□ 0.83
RNF39-202ENST00000376751 TPSD1Q9BZJ3 242 aa20.24■□□□□ 0.83
RNF39-202ENST00000376751 MTHFD2LQ9H903 347 aaPredicted RBP20.24■□□□□ 0.83
RNF39-202ENST00000376751 GALNT8Q9NY28 637 aa20.24■□□□□ 0.83
RNF39-202ENST00000376751 LOC100506127A0A0U1RQW1 187 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 TLX2O43763 284 aaPredicted RBP20.23■□□□□ 0.83
RNF39-202ENST00000376751 GPR75O95800 540 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 RPLP0P05388 317 aaKnown RBP20.23■□□□□ 0.83
RNF39-202ENST00000376751 CT62P0C5K7 136 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 CKMT1AP12532 417 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 SERPINB10P48595 397 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 MGAT2Q10469 447 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 GAS6Q14393 721 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 EXOSC7Q15024 291 aaKnown RBP20.23■□□□□ 0.83
RNF39-202ENST00000376751 SYT14P1Q58G82 188 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 MEDAGQ5VYS4 303 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 ZNF730Q6ZMV8 503 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 PLEKHM3Q6ZWE6 761 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 FAM26EQ8N5C1 309 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 ZNF655Q8N720 491 aaPredicted RBP20.23■□□□□ 0.83
RNF39-202ENST00000376751 GNPDA2Q8TDQ7 276 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 NR4A3Q92570 626 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 FAM46AQ96IP4 442 aaKnown RBP20.23■□□□□ 0.83
RNF39-202ENST00000376751 MGLLQ99685 303 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 MCHR1Q99705 422 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 CENPOQ9BU64 300 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 FBXO34Q9NWN3 711 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 MBTPS2O43462 519 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 RDH16O75452 317 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 GSTM3P21266 225 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 NT5EP21589 574 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 OMPP47874 163 aa20.23■□□□□ 0.83
RNF39-202ENST00000376751 MAZP56270 477 aaKnown RBP20.23■□□□□ 0.83
RNF39-202ENST00000376751 EEF1A1P68104 462 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms