RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 MSANTD3Q96H12 275 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 MGLLQ99685 303 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 PRDM9Q9NQV7 894 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 FBXO8Q9NRD0 319 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 WDR45Q9Y484 360 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 CHST2Q9Y4C5 530 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 KLK4Q9Y5K2 254 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 TDRD6O60522 2096 aaKnown RBP18.91■□□□□ 0.62
VSX1-202ENST00000376709 KNL1Q8NG31 2342 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 AP3D1O14617 1153 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 SRFP11831 508 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 GIPRP48546 466 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 PCYT1AP49585 367 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 HOXC5Q00444 222 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 DUSP5Q16690 384 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 TRMT12Q53H54 448 aaKnown RBP18.91■□□□□ 0.62
VSX1-202ENST00000376709 ENTPD8Q5MY95 495 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 MFSD4BQ5TF39 518 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 MEDAGQ5VYS4 303 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 RNF44Q7L0R7 432 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 BCDIN3DQ7Z5W3 292 aaKnown RBP18.91■□□□□ 0.62
VSX1-202ENST00000376709 MEX3DQ86XN8 651 aaKnown RBP18.91■□□□□ 0.62
VSX1-202ENST00000376709 CLIP4Q8N3C7 705 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 CSNK1A1LQ8N752 337 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 OR6Q1Q8NGQ2 317 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 COX4I2Q96KJ9 171 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 CCDC3Q9BQI4 270 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 OR51E2Q9H255 320 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 PRO3102Q9H379 93 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 MTHFD2LQ9H903 347 aaPredicted RBP18.91■□□□□ 0.62
VSX1-202ENST00000376709 SEMA4GQ9NTN9 838 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 FAM170BA6NMN3 283 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 PRKYO43930 277 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 SULT1C4O75897 302 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 GRK5P34947 590 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 UGT2B10P36537 528 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 PPP1CAP62136 330 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 HHEXQ03014 270 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 ZNF91Q05481 1191 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 C1orf61Q13536 156 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 FZD2Q14332 565 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 RGS21Q2M5E4 152 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 OOSP2Q86WS3 158 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 PEX5LQ8IYB4 626 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 OR5T3Q8NGG3 340 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 MCFD2Q8NI22 146 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 DOK4Q8TEW6 326 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 DIO2Q92813 273 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 TMEM80Q96HE8 168 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 CHCHD6Q9BRQ6 235 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 TSSK6Q9BXA6 273 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 POLDIP3Q9BY77 421 aaKnown RBP18.9■□□□□ 0.62
VSX1-202ENST00000376709 ADAP2Q9NPF8 381 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 TBCCD1Q9NVR7 557 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 ZNF232Q9UNY5 417 aa18.9■□□□□ 0.62
VSX1-202ENST00000376709 ZNF443Q9Y2A4 671 aaPredicted RBP18.9■□□□□ 0.62
VSX1-202ENST00000376709 IGLV3-19P01714 112 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 OCM2P0CE71 109 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 OCMP0CE72 109 aaPredicted RBP18.89■□□□□ 0.62
VSX1-202ENST00000376709 DBTP11182 482 aaKnown RBP18.89■□□□□ 0.62
VSX1-202ENST00000376709 CHRNB1P11230 501 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 CSTF2P33240 577 aaKnown RBP eCLIP18.89■□□□□ 0.62
VSX1-202ENST00000376709 TRHRP34981 398 aaPredicted RBP18.89■□□□□ 0.62
VSX1-202ENST00000376709 SMSP52788 366 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 VSX2P58304 361 aaPredicted RBP18.89■□□□□ 0.62
VSX1-202ENST00000376709 SHC2P98077 582 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 OCLNQ16625 522 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 TSTQ16762 297 aaKnown RBP18.89■□□□□ 0.62
VSX1-202ENST00000376709 ARHGAP11BQ3KRB8 267 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 PUS10Q3MIT2 529 aaKnown RBP18.89■□□□□ 0.62
VSX1-202ENST00000376709 ZNF628Q5EBL2 1059 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 TYW3Q6IPR3 259 aaKnown RBP18.89■□□□□ 0.62
VSX1-202ENST00000376709 PLEKHM3Q6ZWE6 761 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 SLC34A3Q8N130 599 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 KBTBD8Q8NFY9 601 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 TEX47Q8TBZ9 253 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 CHPT1Q8WUD6 406 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 EGLN3Q9H6Z9 239 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 CLCA2Q9UQC9 943 aa18.89■□□□□ 0.62
VSX1-202ENST00000376709 FGF17O60258 216 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 BMP4P12644 408 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 TYRP1P17643 537 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 LARS2Q15031 903 aaKnown RBP18.89■□□□□ 0.61
VSX1-202ENST00000376709 MANEAQ5SRI9 462 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 ACSM5Q6NUN0 579 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 ARMC6Q6NXE6 501 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 ZNF438Q7Z4V0 828 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 SNX29P2Q8IUI4 249 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 CACTIN-AS1Q8N1I8 211 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 GNPDA2Q8TDQ7 276 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 SLC2A4RGQ9NR83 387 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 STARD5Q9NSY2 213 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 CNIH4Q9P003 139 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 CA14Q9ULX7 337 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 C19orf53Q9UNZ5 99 aaPredicted RBP18.89■□□□□ 0.61
VSX1-202ENST00000376709 SLCO1B1Q9Y6L6 691 aa18.89■□□□□ 0.61
VSX1-202ENST00000376709 CCRL2O00421 344 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 ACP2P11117 423 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 NT5EP21589 574 aa18.88■□□□□ 0.61
VSX1-202ENST00000376709 CDK5Q00535 292 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms