RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 C3orf14Q9HBI5 128 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 NEUROD4Q9HD90 331 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 SIRT5Q9NXA8 310 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 PPP4R1LQ9P1A2 415 aa13.4□□□□□ -0.26
HDAC6-204ENST00000376643 DMGDHQ9UI17 866 aaKnown RBP13.4□□□□□ -0.26
HDAC6-204ENST00000376643 ABCA4P78363 2273 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 NCKAP5O14513 1909 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 SH3D21A4FU49 640 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 PLOD2O00469 737 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 MSTNO14793 375 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 TSPAN2O60636 221 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 CRCPO75575 148 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 ANXA4P09525 319 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-204ENST00000376643 IFI6P09912 130 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 CT45A8P0DMV1 189 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 CT45A9P0DMV2 189 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 ZNF708P17019 499 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 TSPAN8P19075 237 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 DDCP20711 480 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 DPP4P27487 766 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 ZNF155Q12901 538 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-204ENST00000376643 DECR1Q16698 335 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 IMPG1Q17R60 797 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 DEFB113Q30KQ7 82 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 UNC50Q53HI1 259 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 CT45A2Q5DJT8 189 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 SPDYAQ5MJ70 313 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 IKBIPQ70UQ0 350 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 RPS27LQ71UM5 84 aaKnown RBP13.39□□□□□ -0.27
HDAC6-204ENST00000376643 SLC44A2Q8IWA5 706 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-204ENST00000376643 IFT20Q8IY31 132 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 MMP21Q8N119 569 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 TMEM151AQ8N4L1 468 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 C16orf78Q8WTQ4 265 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 INTS12Q96CB8 462 aaKnown RBP13.39□□□□□ -0.27
HDAC6-204ENST00000376643 METTL2AQ96IZ6 378 aaKnown RBP13.39□□□□□ -0.27
HDAC6-204ENST00000376643 TMEM237Q96Q45 408 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 HBEGFQ99075 208 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 FOLH1BQ9HBA9 442 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 Q9N2J8 555 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 BEX4Q9NWD9 120 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-204ENST00000376643 GALNT8Q9NY28 637 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 CLCF1Q9UBD9 225 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 HEY2Q9UBP5 337 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 DCDC2Q9UHG0 476 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 ZNF225Q9UK10 706 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 EXPH5Q8NEV8 1989 aa13.39□□□□□ -0.27
HDAC6-204ENST00000376643 A0A1B0GTL3 188 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 KDM4EB2RXH2 506 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-204ENST00000376643 PPP6CO00743 305 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 HCRTR2O43614 444 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 DLX3O60479 287 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 SBK3P0C264 359 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 EVI2BP34910 448 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 LHX2P50458 406 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 AGFG1P52594 562 aaKnown RBP13.38□□□□□ -0.27
HDAC6-204ENST00000376643 OCRLQ01968 901 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 LUZP2Q86TE4 346 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 UHMK1Q8TAS1 419 aaKnown RBP13.38□□□□□ -0.27
HDAC6-204ENST00000376643 LINC01560Q8TB33 94 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 RNF138Q8WVD3 245 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 KAT2AQ92830 837 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 SLC39A3Q9BRY0 314 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 DDX18Q9NVP1 670 aaKnown RBP13.38□□□□□ -0.27
HDAC6-204ENST00000376643 ZNF226Q9NYT6 803 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 TMEM216Q9P0N5 145 aa13.38□□□□□ -0.27
HDAC6-204ENST00000376643 PSMC3IPQ9P2W1 217 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-204ENST00000376643 SETD2Q9BYW2 2564 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-204ENST00000376643 C2orf72A6NCS6 295 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 SLC22A20A6NK97 555 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 FAM171A2A8MVW0 826 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 ARHGEF9O43307 516 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 GLRA3O75311 464 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 ATE1O95260 518 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 FCGR2AP12318 317 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 DDX5P17844 614 aaKnown RBP13.37□□□□□ -0.27
HDAC6-204ENST00000376643 ECHS1P30084 290 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 NCBP2P52298 156 aaKnown RBP eCLIP13.37□□□□□ -0.27
HDAC6-204ENST00000376643 CLDN18P56856 261 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 CORO7P57737 925 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 RPS3AP61247 264 aaKnown RBP13.37□□□□□ -0.27
HDAC6-204ENST00000376643 DUSP2Q05923 314 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 SHEQ5VZ18 495 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 CEP112Q8N8E3 955 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 NOA1Q8NC60 698 aaKnown RBP13.37□□□□□ -0.27
HDAC6-204ENST00000376643 GFM2Q969S9 779 aaKnown RBP13.37□□□□□ -0.27
HDAC6-204ENST00000376643 APIPQ96GX9 242 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 PIGQQ9BRB3 760 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 LIME1Q9H400 295 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 PPCSQ9HAB8 311 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 MID1IP1Q9NPA3 183 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 FANCFQ9NPI8 374 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 RRAGDQ9NQL2 400 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-204ENST00000376643 FAM120CQ9NX05 1096 aaKnown RBP13.37□□□□□ -0.27
HDAC6-204ENST00000376643 ELOVL5Q9NYP7 299 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 TAS2R7Q9NYW3 318 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 FBXL2Q9UKC9 423 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 ITPR3Q14573 2671 aa13.37□□□□□ -0.27
HDAC6-204ENST00000376643 FREM3P0C091 2139 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms