RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 EFHD2Q96C19 240 aaPredicted RBP14.23□□□□□ -0.13
SDHB-201ENST00000375499 ELP4Q96EB1 424 aa14.23□□□□□ -0.13
SDHB-201ENST00000375499 SLC35A4Q96G79 324 aa14.23□□□□□ -0.13
SDHB-201ENST00000375499 COL21A1Q96P44 957 aa14.23□□□□□ -0.13
SDHB-201ENST00000375499 ADOQ96SZ5 270 aa14.23□□□□□ -0.13
SDHB-201ENST00000375499 SPOCK3Q9BQ16 436 aa14.23□□□□□ -0.13
SDHB-201ENST00000375499 C1orf50Q9BV19 199 aa14.23□□□□□ -0.13
SDHB-201ENST00000375499 REEP4Q9H6H4 257 aa14.23□□□□□ -0.13
SDHB-201ENST00000375499 KLRF1Q9NZS2 232 aa14.23□□□□□ -0.13
SDHB-201ENST00000375499 B4GALT7Q9UBV7 327 aa14.23□□□□□ -0.13
SDHB-201ENST00000375499 ACAD8Q9UKU7 415 aa14.23□□□□□ -0.13
SDHB-201ENST00000375499 MAPRE3Q9UPY8 281 aa14.23□□□□□ -0.13
SDHB-201ENST00000375499 WBP11Q9Y2W2 641 aaKnown RBP14.23□□□□□ -0.13
SDHB-201ENST00000375499 NUP214P35658 2090 aaPredicted RBP14.22□□□□□ -0.13
SDHB-201ENST00000375499 NAV3Q8IVL0 2385 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 FIGNL2A6NMB9 653 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 CTIFO43310 598 aaKnown RBP14.22□□□□□ -0.13
SDHB-201ENST00000375499 COQ9O75208 318 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 TRAPPC6AO75865 159 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 HPNP05981 417 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 GLI4P10075 376 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 ADH7P40394 386 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 FRKP42685 505 aaPredicted RBP14.22□□□□□ -0.13
SDHB-201ENST00000375499 RPP38P78345 283 aaKnown RBP14.22□□□□□ -0.13
SDHB-201ENST00000375499 WIPI1Q5MNZ9 446 aaPredicted RBP14.22□□□□□ -0.13
SDHB-201ENST00000375499 SEM1Q6ZVN7 128 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 PACS2Q86VP3 889 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 NUDCD3Q8IVD9 361 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 EID3Q8N140 333 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 SARAFQ96BY9 339 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 ZNF764Q96H86 408 aaPredicted RBP14.22□□□□□ -0.13
SDHB-201ENST00000375499 TTYH2Q9BSA4 534 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 UCK2Q9BZX2 261 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 STMN4Q9H169 189 aaPredicted RBP14.22□□□□□ -0.13
SDHB-201ENST00000375499 CENPHQ9H3R5 247 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 EML4Q9HC35 981 aaKnown RBP14.22□□□□□ -0.13
SDHB-201ENST00000375499 SERHLQ9NQF3 203 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 DDX18Q9NVP1 670 aaKnown RBP14.22□□□□□ -0.13
SDHB-201ENST00000375499 TAS2R9Q9NYW1 312 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 CSMD2Q7Z408 3487 aa14.22□□□□□ -0.13
SDHB-201ENST00000375499 TACC2O95359 2948 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 C15orf38-AP3S2A0A0A6YYH1 394 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 NKX2-6A6NCS4 301 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 FAM90A27PA6NNH2 459 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 TBX19O60806 448 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 PEX11AO75192 247 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 CYP4B1P13584 511 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 CD1EP15812 388 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 SERPINB5P36952 375 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 GAS1P54826 345 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 WNT3P56703 355 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 TFF3Q07654 80 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 PTGR1Q14914 329 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 CHI3L2Q15782 390 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 C1orf185Q5T7R7 199 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 WLSQ5T9L3 541 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 TMEM211Q6ICI0 200 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 SLC30A6Q6NXT4 461 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 LARP4Q71RC2 724 aaKnown RBP eCLIP14.21□□□□□ -0.13
SDHB-201ENST00000375499 YRDCQ86U90 279 aaKnown RBP14.21□□□□□ -0.13
SDHB-201ENST00000375499 ULK2Q8IYT8 1036 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 LIX1Q8N485 282 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 ZNF781Q8N8C0 355 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 FAM83FQ8NEG4 500 aaPredicted RBP14.21□□□□□ -0.13
SDHB-201ENST00000375499 OR1J4Q8NGS1 313 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 RND1Q92730 232 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 PPCDCQ96CD2 204 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 GIMAP5Q96F15 307 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 SORT1Q99523 831 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 RTN4RQ9BZR6 473 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 SSU72Q9NP77 194 aaKnown RBP14.21□□□□□ -0.13
SDHB-201ENST00000375499 ALKBH4Q9NXW9 302 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 SH3BP4Q9P0V3 963 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 FBXL2Q9UKC9 423 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 TMED5Q9Y3A6 229 aa14.21□□□□□ -0.13
SDHB-201ENST00000375499 A0A0G2JNJ9 132 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 GXYLT2A0PJZ3 443 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 SCAMP2O15127 329 aaKnown RBP14.2□□□□□ -0.14
SDHB-201ENST00000375499 WDR1O75083 606 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 SLITRK5O94991 958 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 SERPINE1P05121 402 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 IL12BP29460 328 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 GAB1Q13480 694 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 TOMM20Q15388 145 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 C6orf136Q5SQH8 315 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 B3GNT6Q6ZMB0 384 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 ACBD4Q8NC06 268 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 OR7A2PQ8NGA2 310 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 FBXO30Q8TB52 745 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 CA5BP1Q8WTZ4 195 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 PPP1R36Q96LQ0 422 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 PPP3R2Q96LZ3 170 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 TIMP4Q99727 224 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 LMF2Q9BU23 707 aaKnown RBP14.2□□□□□ -0.14
SDHB-201ENST00000375499 UGT2B28Q9BY64 529 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 MCCC2Q9HCC0 563 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 EQTNQ9NQ60 294 aa14.2□□□□□ -0.14
SDHB-201ENST00000375499 NPDC1Q9NQX5 325 aaPredicted RBP14.2□□□□□ -0.14
SDHB-201ENST00000375499 SIRT3Q9NTG7 399 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms