RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 AASSQ9UDR5 926 aa16.79■□□□□ 0.28
HLA-DQB1-201ENST00000374943 IGHV1OR21-1A0A087WYE8 117 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PTGES3LE9PB15 166 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 H0YIG0 161 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 FAM20BO75063 409 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CBX7O95931 251 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 GIMD1P0DJR0 217 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 POU2F1P14859 743 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CHMP24386 653 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 AVPR1BP47901 424 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ILKQ13418 452 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PTGES3Q15185 160 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 DCST2Q5T1A1 773 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PODNL1Q6PEZ8 512 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 VWA5B2Q8N398 1253 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SLC25A45Q8N413 288 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 MORN4Q8NDC4 146 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 UBE2FQ969M7 185 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 FAM122AQ96E09 287 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 POLE3Q9NRF9 147 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 RASSF1Q9NS23 344 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 HCN3Q9P1Z3 774 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SEMA5BQ9P283 1151 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 NDOR1Q9UHB4 597 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 AGAP5A6NIR3 686 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 OR10H2O60403 315 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 GUSBP08236 651 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 GLB1P16278 677 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ALDH6A1Q02252 535 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PIGFQ07326 219 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 GRM7Q14831 915 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 LARS2Q15031 903 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SMN1Q16637 294 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 EIPR1Q53HC9 387 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ERI1Q8IV48 349 aaKnown RBP16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 P3H2Q8IVL5 708 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 SLC35F3Q8IY50 421 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ZNF619Q8N2I2 560 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 COX18Q8N8Q8 333 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 DIO2Q92813 273 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 LHPPQ9H008 270 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ZNF226Q9NYT6 803 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 MKLN1Q9UL63 735 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CDC14AQ9UNH5 594 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ZNF232Q9UNY5 417 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 GPR55Q9Y2T6 319 aaPredicted RBP16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PCDHGA10Q9Y5H3 936 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CABIN1Q9Y6J0 2220 aa16.78■□□□□ 0.28
HLA-DQB1-201ENST00000374943 MN1Q10571 1320 aaPredicted RBP16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 COL5A1P20908 1838 aaPredicted RBP16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 UNC13CQ8NB66 2214 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 TRIM64BA6NI03 449 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 H3BMH7 237 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 RGS10O43665 173 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 DUX1O43812 170 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 KIAA0513O60268 411 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 MPZL2O60487 215 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 STX11O75558 287 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 TRMUO75648 421 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 NKX2-2O95096 273 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 S1PR1P21453 382 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ALDH4A1P30038 563 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PPM1FP49593 454 aaPredicted RBP16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CDC42P60953 191 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 EEF1A1P68104 462 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 GPLD1P80108 840 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 MVKQ03426 396 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 COX10Q12887 443 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 EXOSC7Q15024 291 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 NKAIN2Q5VXU1 208 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ZNF836Q6ZNA1 936 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 DGAT2L6Q6ZPD8 337 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PRSS48Q7RTY5 328 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 GALNT12Q8IXK2 581 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ZNF540Q8NDQ6 660 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 PEX11GQ96HA9 241 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 AHCYL2Q96HN2 611 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 LMF2Q9BU23 707 aaKnown RBP16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 FKBP14Q9NWM8 211 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ERVK-18Q9QC07 812 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 CLDN16Q9Y5I7 305 aa16.77■□□□□ 0.28
HLA-DQB1-201ENST00000374943 ASXL3Q9C0F0 2248 aa16.77■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TGFBR3LH3BV60 316 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CLDN4O14493 209 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ZNF749O43361 778 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TPST2O60704 377 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 DBIP07108 87 aaKnown RBP16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PCSK6P29122 969 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GSSP48637 474 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 IDH2P48735 452 aaKnown RBP16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TMBIM6P55061 237 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 OR1D5P58170 312 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TAS2R41P59536 307 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 EMX1Q04741 257 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 BNIP3Q12983 259 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SLC13A2Q13183 592 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 COL9A2Q14055 689 aaPredicted RBP16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TRAM2Q15035 370 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SHBQ15464 509 aa16.76■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GPR107Q5VW38 600 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms