RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 ZNF721Q8TF20 911 aa14.58□□□□□ -0.08
NIPAL3-204ENST00000374399 OSBPL10Q9BXB5 764 aa14.58□□□□□ -0.08
NIPAL3-204ENST00000374399 SLC7A5P2Q9GIP4 190 aa14.58□□□□□ -0.08
NIPAL3-204ENST00000374399 SMURF2Q9HAU4 748 aa14.58□□□□□ -0.08
NIPAL3-204ENST00000374399 CALML5Q9NZT1 146 aa14.58□□□□□ -0.08
NIPAL3-204ENST00000374399 BAG5Q9UL15 447 aa14.58□□□□□ -0.08
NIPAL3-204ENST00000374399 AP4B1Q9Y6B7 739 aa14.58□□□□□ -0.08
NIPAL3-204ENST00000374399 ENPP4Q9Y6X5 453 aa14.58□□□□□ -0.08
NIPAL3-204ENST00000374399 DENRO43583 198 aaKnown RBP14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 PRAMEF2O60811 474 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 DNAJB5O75953 348 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 LGI1O95970 557 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 HBQ1P09105 142 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 RPS4Y1P22090 263 aaKnown RBP14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 ETV5P41161 510 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 SLC37A1P57057 533 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 KCNC4Q03721 635 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 DAG1Q14118 895 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 NSDHLQ15738 373 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 MAPK14Q16539 360 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 TCTN3Q6NUS6 607 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 CARM1Q86X55 608 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 ZDHHC13Q8IUH4 622 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 COX18Q8N8Q8 333 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 MAGEE2Q8TD90 523 aaPredicted RBP14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 FBXL20Q96IG2 436 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 C8orf4Q9NR00 106 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 FAM86C1Q9NVL1 165 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 TMEFF2Q9UIK5 374 aaPredicted RBP14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 RAB26Q9ULW5 256 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 GPR55Q9Y2T6 319 aaPredicted RBP14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 WDR45Q9Y484 360 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 PCDHGB5Q9Y5G0 923 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 PCDHGA8Q9Y5G5 932 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 LYVE1Q9Y5Y7 322 aa14.57□□□□□ -0.08
NIPAL3-204ENST00000374399 A0A1W2PNU3 283 aaPredicted RBP14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 MEN1O00255 615 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 BRINP1O60477 761 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 KCNK2O95069 426 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 TNNI3P19429 210 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 ITIH1P19827 911 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 RRM2P31350 389 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 DNAJA1P31689 397 aaKnown RBP14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 LIMS1P48059 325 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 ALDH3A2P51648 485 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 POU6F2P78424 691 aaPredicted RBP14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 ELAVL1Q15717 326 aaKnown RBP14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 NPTX1Q15818 432 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 MRPL14Q6P1L8 145 aaKnown RBP14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 FIGNL1Q6PIW4 674 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 PIP4P1Q86T03 277 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 RASSF5Q8WWW0 418 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 SPSB2Q99619 263 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 PINK1Q9BXM7 581 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 ITPAQ9BY32 194 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 GABARAPL1Q9H0R8 117 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 SLC26A1Q9H2B4 701 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 VCXQ9H320 206 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 MTHFD2LQ9H903 347 aaPredicted RBP14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 ACER3Q9NUN7 267 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 USE1Q9NZ43 259 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 KCND3Q9UK17 655 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 SAMHD1Q9Y3Z3 626 aaKnown RBP14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 TESMINQ9Y4I5 508 aa14.56□□□□□ -0.08
NIPAL3-204ENST00000374399 AGAP5A6NIR3 686 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 CLDN24A6NM45 220 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 B4E171 279 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 M0R3H8 397 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 PRKNO60260 465 aaPredicted RBP14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 KIAA0513O60268 411 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 TPST2O60704 377 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 CPNE3O75131 537 aaKnown RBP14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 RFPL3O75679 317 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 IFNW1P05000 195 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 ALPPP05187 535 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 RPSAP08865 295 aaKnown RBP14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 FPR1P21462 350 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 TSPAN7P41732 249 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 GPR143P51810 404 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 PLAURQ03405 335 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 ILKQ13418 452 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 GK3PQ14409 553 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 CCDC157Q569K6 752 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 ZNF311Q5JNZ3 666 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 DHRS4L2Q6PKH6 230 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 CLIP4Q8N3C7 705 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 OR7G1Q8NGA0 311 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 OR52P1PQ8NH57 321 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 SLC2A12Q8TD20 617 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 TFAP2CQ92754 450 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 PROX1Q92786 737 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 ZNF347Q96SE7 839 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 EPYCQ99645 322 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 ARHGDIGQ99819 225 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 SPATA5L1Q9BVQ7 753 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 NUDT9Q9BW91 350 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 SOX17Q9H6I2 414 aaPredicted RBP14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 UBAP1Q9NZ09 502 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 ACAD8Q9UKU7 415 aa14.55□□□□□ -0.08
NIPAL3-204ENST00000374399 MUC6Q6W4X9 2439 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms