RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 MMP11P24347 488 aa18.27■□□□□ 0.52
HDAC1-201ENST00000373548 AVPR1BP47901 424 aa18.27■□□□□ 0.52
HDAC1-201ENST00000373548 CXCL12P48061 93 aa18.27■□□□□ 0.52
HDAC1-201ENST00000373548 NUDT6P53370 316 aa18.27■□□□□ 0.52
HDAC1-201ENST00000373548 SRSF5Q13243 272 aaKnown RBP18.27■□□□□ 0.52
HDAC1-201ENST00000373548 ZER1Q7Z7L7 766 aa18.27■□□□□ 0.52
HDAC1-201ENST00000373548 CDRT4Q8N9R6 151 aa18.27■□□□□ 0.52
HDAC1-201ENST00000373548 GGHQ92820 318 aa18.27■□□□□ 0.52
HDAC1-201ENST00000373548 GUCD1Q96NT3 240 aa18.27■□□□□ 0.52
HDAC1-201ENST00000373548 ZNF350Q9GZX5 532 aa18.27■□□□□ 0.52
HDAC1-201ENST00000373548 DUSP22Q9NRW4 184 aa18.27■□□□□ 0.52
HDAC1-201ENST00000373548 IFT52Q9Y366 437 aa18.27■□□□□ 0.52
HDAC1-201ENST00000373548 CENPVL1A0A0U1RR11 272 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 TLCD2A6NGC4 264 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 CLCA1A8K7I4 914 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 RNH1P13489 461 aaKnown RBP18.26■□□□□ 0.51
HDAC1-201ENST00000373548 MAP3K8P41279 467 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 MLLT3P42568 568 aaPredicted RBP18.26■□□□□ 0.51
HDAC1-201ENST00000373548 TAS2R41P59536 307 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 MVKQ03426 396 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 DMWDQ09019 674 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 DYNC1I2Q13409 638 aaKnown RBP18.26■□□□□ 0.51
HDAC1-201ENST00000373548 NDUFA9Q16795 377 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 SLC16A12Q6ZSM3 486 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 PEX5LQ8IYB4 626 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 LINC00471Q8N535 108 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 PIK3R3Q92569 461 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 DIO2Q92813 273 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 C11orf16Q9NQ32 467 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 KLHL28Q9NXS3 571 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 PLCL2Q9UPR0 1127 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 SDK1Q7Z5N4 2213 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 CLDN24A6NM45 220 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 CPSF4LA6NMK7 179 aaKnown RBP18.26■□□□□ 0.51
HDAC1-201ENST00000373548 TGFBR3LH3BV60 316 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 TRHRP34981 398 aaPredicted RBP18.26■□□□□ 0.51
HDAC1-201ENST00000373548 HOXC5Q00444 222 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 DCST2Q5T1A1 773 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 SYT6Q5T7P8 510 aaPredicted RBP18.26■□□□□ 0.51
HDAC1-201ENST00000373548 NKAIN2Q5VXU1 208 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 SLX4IPQ5VYV7 408 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 ZCCHC12Q6PEW1 402 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 CD300LDQ6UXZ3 194 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 ZNF836Q6ZNA1 936 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 NR4A3Q92570 626 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 PEX11GQ96HA9 241 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 STACQ99469 402 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 SEMA4GQ9NTN9 838 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 SOHLH2Q9NX45 425 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 NDOR1Q9UHB4 597 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 SATB2Q9UPW6 733 aa18.26■□□□□ 0.51
HDAC1-201ENST00000373548 HYKKA2RU49 373 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 AGAP5A6NIR3 686 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 CYP7B1O75881 506 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 CBX7O95931 251 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 CCNA2P20248 432 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 C21orf59P57076 290 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 RGS8P57771 180 aaPredicted RBP18.25■□□□□ 0.51
HDAC1-201ENST00000373548 MAT1AQ00266 395 aaKnown RBP18.25■□□□□ 0.51
HDAC1-201ENST00000373548 DUSP8Q13202 625 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 FAM53BQ14153 422 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 GPR68Q15743 365 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 C1orf94Q6P1W5 598 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 COX18Q8N8Q8 333 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 GPA33Q99795 319 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 GPN2Q9H9Y4 310 aaPredicted RBP18.25■□□□□ 0.51
HDAC1-201ENST00000373548 FBXO34Q9NWN3 711 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 SELENONQ9NZV5 590 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 ENPP5Q9UJA9 477 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 NTNG1Q9Y2I2 539 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 RNF215Q9Y6U7 377 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 A0A087WUU8 490 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 RHPN2P1A8MT19 583 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 H3BN98 237 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 BCAT2O15382 392 aaPredicted RBP18.25■□□□□ 0.51
HDAC1-201ENST00000373548 OR10H2O60403 315 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 MPZL2O60487 215 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 NSA2O95478 260 aaKnown RBP18.25■□□□□ 0.51
HDAC1-201ENST00000373548 ZBTB11O95625 1053 aaPredicted RBP18.25■□□□□ 0.51
HDAC1-201ENST00000373548 CCNYL3P0C7X3 344 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 ALDH4A1P30038 563 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 C21orf33P30042 268 aaPredicted RBP18.25■□□□□ 0.51
HDAC1-201ENST00000373548 FNTBP49356 437 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 SKP1P63208 163 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 NFATC3Q12968 1075 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 LARS2Q15031 903 aaKnown RBP18.25■□□□□ 0.51
HDAC1-201ENST00000373548 PTCHD4Q6ZW05 846 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 ZNF619Q8N2I2 560 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 VWA5B2Q8N398 1253 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 GPR151Q8TDV0 419 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 RAB33BQ9H082 229 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 SAP130Q9H0E3 1048 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 TIMMDC1Q9NPL8 285 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 PRDM6Q9NQX0 595 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 GPR83Q9NYM4 423 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 EPHA6Q9UF33 1036 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 ZNF232Q9UNY5 417 aa18.25■□□□□ 0.51
HDAC1-201ENST00000373548 CACNA1IQ9P0X4 2223 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 STX11O75558 287 aa18.24■□□□□ 0.51
HDAC1-201ENST00000373548 CDK1P06493 297 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms