RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CHDHQ8NE62 594 aaPredicted RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 CNOT9Q92600 299 aaKnown RBP10.95□□□□□ -0.66
VCL-202ENST00000372755 ZFYVE21Q9BQ24 234 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 GPR83Q9NYM4 423 aa10.95□□□□□ -0.66
VCL-202ENST00000372755 HSD17B1P14061 328 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 MZT1Q08AG7 82 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 OR4D1Q15615 310 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 TMEM53Q6P2H8 277 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 GPR62Q9BZJ7 368 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 PAQR5Q9NXK6 330 aaPredicted RBP10.94□□□□□ -0.66
VCL-202ENST00000372755 B3GALT1Q9Y5Z6 326 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 RTCAO00442 366 aaKnown RBP10.94□□□□□ -0.66
VCL-202ENST00000372755 SHOXO15266 292 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 DENRO43583 198 aaKnown RBP10.94□□□□□ -0.66
VCL-202ENST00000372755 SSX4O60224 188 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 ETFAP13804 333 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 GCH1P30793 250 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 KRBOX4Q5JUW0 171 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 ZNF852Q6ZMS4 543 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 USP53Q70EK8 1073 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 TMEM150AQ86TG1 271 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 GDPD1Q8N9F7 314 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 TEPSINQ96N21 525 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 FEVQ99581 238 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 MARCH4Q9P2E8 410 aaPredicted RBP10.94□□□□□ -0.66
VCL-202ENST00000372755 ADAMTS6Q9UKP5 1117 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 B3GNT3Q9Y2A9 372 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 C2orf72A6NCS6 295 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 C12orf71A8MTZ7 269 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 LILRB5O75023 590 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 SEMA4FO95754 770 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 ZFP41Q8N8Y5 198 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 SYT14Q8NB59 555 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 OR5T1Q8NG75 326 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 OR6C4Q8NGE1 309 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 SLC7A13Q8TCU3 470 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 SFXN5Q8TD22 340 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 OR14A2Q96R54 314 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 ERVK13-1Q9NX77 482 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 ENPP4Q9Y6X5 453 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 TRAV18A0A075B6X5 111 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 TAS2R20P59543 309 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 C6orf89Q6UWU4 347 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 GPR149Q86SP6 731 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 METTL2AQ96IZ6 378 aaKnown RBP10.94□□□□□ -0.66
VCL-202ENST00000372755 USB1Q9BQ65 265 aaKnown RBP10.94□□□□□ -0.66
VCL-202ENST00000372755 PTGDR2Q9Y5Y4 395 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 ANKRD33BA6NCL7 494 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 NAP1L6A6NFF2 107 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 NFKBIEO00221 500 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 MRPS14O60783 128 aaKnown RBP10.94□□□□□ -0.66
VCL-202ENST00000372755 PPP1R3DO95685 299 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 TSPAN15O95858 294 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 BPIP17213 487 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 PRSS3P35030 304 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 NDUFAF5Q5TEU4 345 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 LANCL3Q6ZV70 420 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 ABHD12BQ7Z5M8 362 aaPredicted RBP10.94□□□□□ -0.66
VCL-202ENST00000372755 SNAPC3Q92966 411 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 SLC12A9Q9BXP2 914 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 PPIL3Q9H2H8 161 aaKnown RBP10.94□□□□□ -0.66
VCL-202ENST00000372755 GPN2Q9H9Y4 310 aaPredicted RBP10.94□□□□□ -0.66
VCL-202ENST00000372755 TMEM45AQ9NWC5 275 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 IL20RAQ9UHF4 553 aa10.94□□□□□ -0.66
VCL-202ENST00000372755 UGDHO60701 494 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 ZNF623O75123 536 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 MYF6P23409 242 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 ZNF169Q14929 603 aaPredicted RBP10.93□□□□□ -0.66
VCL-202ENST00000372755 NLGN4XQ8N0W4 816 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 CDRT4Q8N9R6 151 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 TXNDC15Q96J42 360 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 ARHGAP39Q9C0H5 1083 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 XYLT2Q9H1B5 865 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 TSPAN10Q9H1Z9 355 aaPredicted RBP10.93□□□□□ -0.66
VCL-202ENST00000372755 PCTPQ9UKL6 214 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 CA14Q9ULX7 337 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 ENTPD2Q9Y5L3 495 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 SNED1Q8TER0 1413 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 A8MXE2 369 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 CRTAPO75718 401 aaPredicted RBP10.93□□□□□ -0.66
VCL-202ENST00000372755 CSF1P09603 554 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 UBL4AP11441 157 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 UGT2B7P16662 529 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 IL1RNP18510 177 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 DDCP20711 480 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 CDK3Q00526 305 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 CEACAM7Q14002 265 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 MICAQ29983 383 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 MRPL21Q7Z2W9 205 aaKnown RBP10.93□□□□□ -0.66
VCL-202ENST00000372755 KIF18BQ86Y91 864 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 SGPP2Q8IWX5 399 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 ADAMTS19Q8TE59 1207 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 FUNDC2Q9BWH2 189 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 C19orf12Q9NSK7 152 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 ANKMY1Q9P2S6 941 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 TP53TG5Q9Y2B4 290 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 PCDHA9Q9Y5H5 950 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 IRS2Q9Y4H2 1338 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 LOC102723532A0A0G2JNH3 316 aa10.93□□□□□ -0.66
VCL-202ENST00000372755 HSBP1L1C9JCN9 74 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms