RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 EXOSC1Q9Y3B2 195 aaKnown RBP13.92□□□□□ -0.18
COL9A2-202ENST00000372748 OR7A10O76100 309 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 EPPINO95925 133 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 DDCP20711 480 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 CCT3P49368 545 aaKnown RBP13.91□□□□□ -0.18
COL9A2-202ENST00000372748 RGS1Q08116 209 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 ZNF155Q12901 538 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-202ENST00000372748 MINDY4Q4G0A6 757 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 PLA1AQ53H76 456 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 BICRALQ6AI39 1079 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 C1orf94Q6P1W5 598 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 SLC9B2Q86UD5 537 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 SMPDL3AQ92484 453 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 KLK6Q92876 244 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 OR51I1Q9H343 314 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 SPHK2Q9NRA0 654 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 ENAMQ9NRM1 1142 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 SIRT3Q9NTG7 399 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-202ENST00000372748 CLEC4AQ9UMR7 237 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 ICKQ9UPZ9 632 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 K7ESM1 405 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 ACRP10323 421 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 POLR2CP19387 275 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-202ENST00000372748 PRLHRP49683 370 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 SRP54P61011 504 aaKnown RBP13.91□□□□□ -0.18
COL9A2-202ENST00000372748 TJAP1Q5JTD0 557 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 VASNQ6EMK4 673 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 SLC39A5Q6ZMH5 540 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 TRAPPC5Q8IUR0 188 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 BEST4Q8NFU0 473 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 OR5P2Q8WZ92 322 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 DACT3Q96B18 629 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-202ENST00000372748 FAM46AQ96IP4 442 aaKnown RBP13.91□□□□□ -0.18
COL9A2-202ENST00000372748 TRAF4Q9BUZ4 470 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-202ENST00000372748 FOLH1BQ9HBA9 442 aa13.91□□□□□ -0.18
COL9A2-202ENST00000372748 A0A087WUU8 490 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 SNTNA6NMZ2 147 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 WASH3PC4AMC7 463 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 KPNA3O00505 521 aaPredicted RBP13.9□□□□□ -0.18
COL9A2-202ENST00000372748 EIF4EP06730 217 aaKnown RBP13.9□□□□□ -0.18
COL9A2-202ENST00000372748 ALPPL2P10696 532 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 RPA4Q13156 261 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 ANGPT1Q15389 498 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 DUSP6Q16828 381 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 FAM27D1Q5T7N8 215 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 LIPIQ6XZB0 460 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 ZNF782Q6ZMW2 699 aaPredicted RBP13.9□□□□□ -0.18
COL9A2-202ENST00000372748 PRICKLE2Q7Z3G6 844 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 TRMT11Q7Z4G4 463 aaKnown RBP13.9□□□□□ -0.18
COL9A2-202ENST00000372748 SAMD12Q8N8I0 201 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 RFT1Q96AA3 541 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 TIFAQ96CG3 184 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 SECISBP2Q96T21 854 aaKnown RBP13.9□□□□□ -0.18
COL9A2-202ENST00000372748 OR2AG1Q9H205 316 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 ISG20L2Q9H9L3 353 aaKnown RBP13.9□□□□□ -0.18
COL9A2-202ENST00000372748 TDP1Q9NUW8 608 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 SLCO1C1Q9NYB5 712 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 PTGFRNQ9P2B2 879 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 IL36AQ9UHA7 158 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 UBXN7O94888 489 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 SYN1P17600 705 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 PNLIPRP1P54315 467 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 DCDC1P59894 354 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 NTRK2Q16620 822 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 EOGTQ5NDL2 527 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 TMEM107Q6UX40 140 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 KLHDC8AQ8IYD2 350 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 HSD17B8Q92506 261 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 TM4SF18Q96CE8 201 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 MS4A3Q96HJ5 214 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 MRGPRX3Q96LB0 322 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 TBX5Q99593 518 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 RNF208Q9H0X6 261 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 ZBP1Q9H171 429 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 BEX1Q9HBH7 125 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.9□□□□□ -0.18
COL9A2-202ENST00000372748 MRPS18AQ9NVS2 196 aaKnown RBP13.9□□□□□ -0.18
COL9A2-202ENST00000372748 ZNF224Q9NZL3 707 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 ADAM30Q9UKF2 790 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 PRKAB1Q9Y478 270 aa13.9□□□□□ -0.18
COL9A2-202ENST00000372748 FAM183AA6NL82 134 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 SLC2A10O95528 541 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 TBX6O95947 436 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-202ENST00000372748 RAF1P04049 648 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 STOMP27105 288 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 BTCP35070 178 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 SOX9P48436 509 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 NTHL1P78549 312 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 RIN1Q13671 783 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 CD300LDQ6UXZ3 194 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 IKBIPQ70UQ0 350 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 GPR135Q8IZ08 494 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 SLC38A2Q96QD8 506 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 SGPP1Q9BX95 441 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 HEXA-AS1Q9H8Q6 139 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 TEX10Q9NXF1 929 aaPredicted RBP13.89□□□□□ -0.19
COL9A2-202ENST00000372748 SLC9A8Q9Y2E8 581 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 CSNK1G3Q9Y6M4 447 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 LINC00862A6NCI5 91 aa13.89□□□□□ -0.19
COL9A2-202ENST00000372748 FAM170BA6NMN3 283 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms