RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ACY1Q03154 408 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 FUT7Q11130 342 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 BIKQ13323 160 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF267Q14586 743 aaPredicted RBP16.3■□□□□ 0.2
SSBP3-203ENST00000371319 KCTD21Q4G0X4 260 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 C1orf189Q5VU69 101 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 BMP8AQ7Z5Y6 402 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 C8orf59Q8N0T1 100 aaPredicted RBP16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF619Q8N2I2 560 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF786Q8N393 782 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 RCBTB1Q8NDN9 531 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 OR9Q2Q8NGE9 314 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 CNDP2Q96KP4 475 aaKnown RBP16.3■□□□□ 0.2
SSBP3-203ENST00000371319 PTCHD1Q96NR3 888 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ALPK1Q96QP1 1244 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 GABARAPL3Q9BY60 117 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 SYNDIG1Q9H7V2 258 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 IFT52Q9Y366 437 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 FER1L5A0AVI2 2057 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 CENPVL1A0A0U1RR11 272 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 TRIM64A6NGJ6 449 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 BCKDKO14874 412 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 KIAA0513O60268 411 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 STX11O75558 287 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 H1F0P07305 194 aaKnown RBP16.3■□□□□ 0.2
SSBP3-203ENST00000371319 CYP4B1P13584 511 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 CDH2P19022 906 aaPredicted RBP16.3■□□□□ 0.2
SSBP3-203ENST00000371319 CBLP22681 906 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ELAVL4P26378 380 aaKnown RBP16.3■□□□□ 0.2
SSBP3-203ENST00000371319 MPLP40238 635 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 EFNA3P52797 238 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 DAB2P98082 770 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 PSG6Q00889 435 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 RHAGQ02094 409 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 IL18R1Q13478 541 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 AP1ARQ63HQ0 302 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF770Q6IQ21 691 aaPredicted RBP16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF836Q6ZNA1 936 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 QSOX2Q6ZRP7 698 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 THAP5Q7Z6K1 395 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 CLIP4Q8N3C7 705 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 PHF10Q8WUB8 498 aaKnown RBP16.3■□□□□ 0.2
SSBP3-203ENST00000371319 VSTM2LQ96N03 204 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF578Q96N58 590 aaPredicted RBP16.3■□□□□ 0.2
SSBP3-203ENST00000371319 NIPSNAP1Q9BPW8 284 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ARRDC1-AS1Q9H2J1 176 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 TRIM45Q9H8W5 580 aaPredicted RBP16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ERVK-19Q9WJR5 959 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 DTX4Q9Y2E6 619 aa16.3■□□□□ 0.2
SSBP3-203ENST00000371319 ZDBF2Q9HCK1 2354 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 AGAP5A6NIR3 686 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 PRAMEF2O60811 474 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 IFNA16P05015 189 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 DUSP3P51452 185 aaPredicted RBP16.29■□□□□ 0.2
SSBP3-203ENST00000371319 EEF1A1P68104 462 aaKnown RBP16.29■□□□□ 0.2
SSBP3-203ENST00000371319 PIN1Q13526 163 aaPredicted RBP16.29■□□□□ 0.2
SSBP3-203ENST00000371319 KEAP1Q14145 624 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 SEC23BQ15437 767 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 MAPK14Q16539 360 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 CLPPQ16740 277 aaPredicted RBP16.29■□□□□ 0.2
SSBP3-203ENST00000371319 TCEAL6Q6IPX3 200 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 FIGNL1Q6PIW4 674 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 NPSR1Q6W5P4 371 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 COX15Q7KZN9 410 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 PEX5LQ8IYB4 626 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 ZNF615Q8N8J6 731 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 TSPAN14Q8NG11 270 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 FBLIM1Q8WUP2 373 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 TSLPQ969D9 159 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 TCEAL3Q969E4 200 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 PRRC1Q96M27 445 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 PITX2Q99697 317 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 CNPPD1Q9BV87 410 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 PAPOLBQ9NRJ5 636 aaKnown RBP16.29■□□□□ 0.2
SSBP3-203ENST00000371319 SIDT1Q9NXL6 827 aaKnown RBP16.29■□□□□ 0.2
SSBP3-203ENST00000371319 KCNE5Q9UJ90 142 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 HCN4Q9Y3Q4 1203 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 PCDHGA8Q9Y5G5 932 aa16.29■□□□□ 0.2
SSBP3-203ENST00000371319 FRS3O43559 492 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 BRINP1O60477 761 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 TPST2O60704 377 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 KCNK2O95069 426 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 THBS1P07996 1170 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 ELK4P28324 431 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 EPHA2P29317 976 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 PGDP52209 483 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 ISL1P61371 349 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 FOXD4Q12950 439 aaPredicted RBP16.28■□□□□ 0.2
SSBP3-203ENST00000371319 NPRL3Q12980 569 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 RAPSNQ13702 412 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 GPR68Q15743 365 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 CTU2Q2VPK5 515 aaKnown RBP16.28■□□□□ 0.2
SSBP3-203ENST00000371319 ARHGAP40Q5TG30 622 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 RHBDD2Q6NTF9 364 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 ZC3H14Q6PJT7 736 aaKnown RBP16.28■□□□□ 0.2
SSBP3-203ENST00000371319 ZAR1Q86SH2 424 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 SLITRK4Q8IW52 837 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 TAGAPQ8N103 731 aa16.28■□□□□ 0.2
SSBP3-203ENST00000371319 PTPMT1Q8WUK0 201 aaPredicted RBP16.28■□□□□ 0.2
SSBP3-203ENST00000371319 RNF31Q96EP0 1072 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms