RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 MRPL19P49406 292 aaKnown RBP13.63□□□□□ -0.23
COL9A1-204ENST00000370496 PSMD4P55036 377 aaKnown RBP13.63□□□□□ -0.23
COL9A1-204ENST00000370496 ALDH6A1Q02252 535 aaKnown RBP13.63□□□□□ -0.23
COL9A1-204ENST00000370496 EFR3AQ14156 821 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 RCAN2Q14206 197 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 DUSP5Q16690 384 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 C6orf10Q5SRN2 563 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 CGB2Q6NT52 195 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 ZCCHC12Q6PEW1 402 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 MSANTD1Q6ZTZ1 278 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 CLEC4FQ8N1N0 589 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 DNAJB8Q8NHS0 232 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 PIK3R3Q92569 461 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 NR4A3Q92570 626 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 TMCO6Q96DC7 493 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 SLC35A4Q96G79 324 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 C16orf58Q96GQ5 468 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 ZNF597Q96LX8 424 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 SECISBP2Q96T21 854 aaKnown RBP13.63□□□□□ -0.23
COL9A1-204ENST00000370496 SLC35A5Q9BS91 424 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 OSBPL11Q9BXB4 747 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 ACTRT3Q9BYD9 372 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 NSRP1Q9H0G5 558 aaKnown RBP13.63□□□□□ -0.23
COL9A1-204ENST00000370496 TSPAN10Q9H1Z9 355 aaPredicted RBP13.63□□□□□ -0.23
COL9A1-204ENST00000370496 RABEP2Q9H5N1 569 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 CCDC167Q9P0B6 97 aa13.63□□□□□ -0.23
COL9A1-204ENST00000370496 CNOT11Q9UKZ1 510 aaKnown RBP13.63□□□□□ -0.23
COL9A1-204ENST00000370496 BOKQ9UMX3 212 aaPredicted RBP13.63□□□□□ -0.23
COL9A1-204ENST00000370496 PRAMEF25A6NGN4 478 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 CCDC154A6NI56 674 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 PYCARD-AS1I3L0S3 204 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 RFXANKO14593 260 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 NKX2-2O95096 273 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 ANP32DO95626 131 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 CNR1P21554 472 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 UQCRC2P22695 453 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 MASP1P48740 699 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 RPS26P62854 115 aaKnown RBP13.62□□□□□ -0.23
COL9A1-204ENST00000370496 FOXK1P85037 733 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 IGFBP7Q16270 282 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 BICRALQ6AI39 1079 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 CDC73Q6P1J9 531 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 NUP54Q7Z3B4 507 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 ZFP62Q8NB50 900 aaPredicted RBP13.62□□□□□ -0.23
COL9A1-204ENST00000370496 SLC16A11Q8NCK7 471 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 ADAMTS15Q8TE58 950 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 CDS1Q92903 461 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 HGDQ93099 445 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 VPS33AQ96AX1 596 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 ITCHQ96J02 903 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 JSRP1Q96MG2 331 aaPredicted RBP13.62□□□□□ -0.23
COL9A1-204ENST00000370496 ZNF317Q96PQ6 595 aaPredicted RBP13.62□□□□□ -0.23
COL9A1-204ENST00000370496 SLX1AQ9BQ83 275 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 INPP5KQ9BT40 448 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 TTTY12Q9BZ98 90 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 GPATCH2Q9NW75 528 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 KLHL14Q9P2G3 628 aa13.62□□□□□ -0.23
COL9A1-204ENST00000370496 GXYLT2A0PJZ3 443 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 PINLYPA6NC86 204 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 FAM166BA8MTA8 275 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 J3QKU1 62 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 TSPAN2O60636 221 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 EDN3P14138 238 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 ZFP36L2P47974 494 aaKnown RBP13.61□□□□□ -0.23
COL9A1-204ENST00000370496 KHKP50053 298 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 PNLIPRP2P54317 469 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 GYS2P54840 703 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 POU6F2P78424 691 aaPredicted RBP13.61□□□□□ -0.23
COL9A1-204ENST00000370496 ELOAQ14241 798 aaKnown RBP13.61□□□□□ -0.23
COL9A1-204ENST00000370496 AGKQ53H12 422 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 DESI1Q6ICB0 168 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 ZNF621Q6ZSS3 439 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 C6orf120Q7Z4R8 191 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 SLC22A16Q86VW1 577 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 GALNT11Q8NCW6 608 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 HOXB13Q92826 284 aaPredicted RBP13.61□□□□□ -0.23
COL9A1-204ENST00000370496 SPDL1Q96EA4 605 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 NODALQ96S42 347 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 STACQ99469 402 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 FAM107BQ9H098 131 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 DUSP22Q9NRW4 184 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 TUBA8Q9NY65 449 aaPredicted RBP13.61□□□□□ -0.23
COL9A1-204ENST00000370496 B4GALT7Q9UBV7 327 aa13.61□□□□□ -0.23
COL9A1-204ENST00000370496 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.61□□□□□ -0.23
COL9A1-204ENST00000370496 NUP214P35658 2090 aaPredicted RBP13.61□□□□□ -0.23
COL9A1-204ENST00000370496 ANKRD33BA6NCL7 494 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 NPIPA5E9PKD4 350 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 ICOSLGO75144 302 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 IL33O95760 270 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 GSNP06396 782 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 CYP4B1P13584 511 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 LSP1P33241 339 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 EVI2BP34910 448 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 MAP3K8P41279 467 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 CASP3P42574 277 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 CDKN2CP42773 168 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 PPIAP62937 165 aaKnown RBP13.6□□□□□ -0.23
COL9A1-204ENST00000370496 GNGT1P63211 74 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 METTL21CQ5VZV1 264 aa13.6□□□□□ -0.23
COL9A1-204ENST00000370496 SAXO2Q658L1 398 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms