RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 A0A1W2PRB8 838 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 DHRS12A0PJE2 317 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 FITM1A5D6W6 292 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 PYCARD-AS1I3L0S3 204 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 CTSVO60911 334 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 SDC3O75056 442 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 CPSF4O95639 269 aaKnown RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 IL18BPO95998 194 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 HOXB6P17509 224 aaKnown RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 CDH3P22223 829 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 FRKP42685 505 aaPredicted RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 POLE2P56282 527 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 OR4D2P58180 307 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 SLAMF1Q13291 335 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 GLYATQ6IB77 296 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 ERICH5Q6P6B1 374 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 KRT77Q7Z794 578 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 CALHM3Q86XJ0 350 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 ZNF761Q86XN6 746 aaPredicted RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 AURKBQ96GD4 344 aaPredicted RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 TACO1Q9BSH4 297 aaKnown RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 RAB33BQ9H082 229 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 KLHL31Q9H511 634 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 IKZF5Q9H5V7 419 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 GORASP2Q9H8Y8 452 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 TPT1P8Q9HAU6 139 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 SLAMF7Q9NQ25 335 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 ACSS1Q9NUB1 689 aaPredicted RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 ARMC1Q9NVT9 282 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 TAS2R9Q9NYW1 312 aa8.2□□□□□ -1.1
TPM3-213ENST00000368545 NUP214P35658 2090 aaPredicted RBP8.2□□□□□ -1.1
TPM3-213ENST00000368545 GOLGA4Q13439 2230 aaKnown RBP8.19□□□□□ -1.1
TPM3-213ENST00000368545 CACNA1EQ15878 2313 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 TXNDC9O14530 226 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 CASQ2O14958 399 aaPredicted RBP8.19□□□□□ -1.1
TPM3-213ENST00000368545 NUDT21O43809 227 aaKnown RBP8.19□□□□□ -1.1
TPM3-213ENST00000368545 C6orf47O95873 294 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 IL10P22301 178 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 HBA1P69905 142 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 PRR5P85299 388 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 FADDQ13158 208 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 CYP51A1Q16850 503 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 HLA-BQ31612 363 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 NDUFAF5Q5TEU4 345 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 ARHGAP40Q5TG30 622 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 SLC34A3Q8N130 599 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 CARFQ8N187 725 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 CATSPER1Q8NEC5 780 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 OR8K5Q8NH50 307 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 ZFP28Q8NHY6 868 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 UTP15Q8TED0 518 aaKnown RBP8.19□□□□□ -1.1
TPM3-213ENST00000368545 ZFP90Q8TF47 636 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 CIDECQ96AQ7 238 aaPredicted RBP8.19□□□□□ -1.1
TPM3-213ENST00000368545 FCRL4Q96PJ5 515 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 CD180Q99467 661 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 CCDC3Q9BQI4 270 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 IRAK4Q9NWZ3 460 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 TEX10Q9NXF1 929 aaPredicted RBP8.19□□□□□ -1.1
TPM3-213ENST00000368545 AASSQ9UDR5 926 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 EPHA6Q9UF33 1036 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 PHF11Q9UIL8 331 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 PI4KAP42356 2102 aa8.19□□□□□ -1.1
TPM3-213ENST00000368545 A0A0G2JN53 185 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 TLCD2A6NGC4 264 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 HMX3A6NHT5 357 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 C4orf51C9J302 202 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 H0YGG7 62 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 HNRNPRO43390 633 aaKnown RBP8.18□□□□□ -1.1
TPM3-213ENST00000368545 TMCC2O75069 709 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 CD1AP06126 327 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 ABCB1P08183 1280 aaPredicted RBP8.18□□□□□ -1.1
TPM3-213ENST00000368545 ZNF888P0CJ79 500 aaPredicted RBP8.18□□□□□ -1.1
TPM3-213ENST00000368545 SMIM10L1P0DMW3 83 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 GAAP10253 952 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 FCGR1AP12314 374 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 FOSL1P15407 271 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 NTSP30990 170 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 TRHRP34981 398 aaPredicted RBP8.18□□□□□ -1.1
TPM3-213ENST00000368545 BUD31P41223 144 aaPredicted RBP8.18□□□□□ -1.1
TPM3-213ENST00000368545 RAD52P43351 418 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 GZMMP51124 257 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 ARF3P61204 181 aaPredicted RBP8.18□□□□□ -1.1
TPM3-213ENST00000368545 DCAF7P61962 342 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 GAB1Q13480 694 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 IRGCQ6NXR0 463 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 OR5P2Q8WZ92 322 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 ZDHHC12Q96GR4 267 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 SMIM10Q96HG1 83 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 TRAPPC9Q96Q05 1148 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 MACROD1Q9BQ69 325 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 SLC35A5Q9BS91 424 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 CHRNA10Q9GZZ6 450 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 RPF2Q9H7B2 306 aaKnown RBP8.18□□□□□ -1.1
TPM3-213ENST00000368545 SYNPO2LQ9H987 977 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 MS4A12Q9NXJ0 267 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 NLGN3Q9NZ94 848 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 GPR160Q9UJ42 338 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 RIMS3Q9UJD0 308 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 ASB4Q9Y574 426 aa8.18□□□□□ -1.1
TPM3-213ENST00000368545 KNL1Q8NG31 2342 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms