RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 LHPPQ9H008 270 aa9.27□□□□□ -0.93
TPM3-210ENST00000368530 COQ10BQ9H8M1 238 aa9.27□□□□□ -0.93
TPM3-210ENST00000368530 SLC35C2Q9NQQ7 365 aa9.27□□□□□ -0.93
TPM3-210ENST00000368530 CUTCQ9NTM9 273 aa9.27□□□□□ -0.93
TPM3-210ENST00000368530 FAF1Q9UNN5 650 aaPredicted RBP9.27□□□□□ -0.93
TPM3-210ENST00000368530 CSMD2Q7Z408 3487 aa9.27□□□□□ -0.93
TPM3-210ENST00000368530 A0A1W2PS29 197 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 RAP2AP10114 183 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 NR2F6P10588 404 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 FCGR1AP12314 374 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 ELAVL4P26378 380 aaKnown RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 NTSP30990 170 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 GPC1P35052 558 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 FEN1P39748 380 aaKnown RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 OR1D4P47884 311 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 NCBP2P52298 156 aaKnown RBP eCLIP9.26□□□□□ -0.93
TPM3-210ENST00000368530 MVDP53602 400 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 DUSP2Q05923 314 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 NRF1Q16656 503 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 PRSS41Q7RTY9 318 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 ANKFN1Q8N957 763 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 PAPD5Q8NDF8 572 aaKnown RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 OR52N2Q8NGI0 321 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 RELTQ969Z4 430 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 ZBED6CLQ96FA7 236 aaPredicted RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 TAAR6Q96RI8 345 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 GLIPR2Q9H4G4 154 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 SOX17Q9H6I2 414 aaPredicted RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 DCAF13Q9NV06 445 aaKnown RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 GPATCH2Q9NW75 528 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 LYARQ9NX58 379 aaKnown RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 KLK4Q9Y5K2 254 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 DIDO1Q9BTC0 2240 aaKnown RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 CNTRLQ7Z7A1 2325 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 NUP210LQ5VU65 1888 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 URADA6NGE7 173 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 PDLIM1O00151 329 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 SOCS2O14508 198 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 PROM1O43490 865 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 B3GALT2O43825 422 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 FKBP9O95302 570 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 KRT75O95678 551 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 BMP2P12643 396 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 CPN2P22792 545 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 PRIM2P49643 509 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 ARFIP1P53367 373 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 MFAP5Q13361 173 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 TP53BP2Q13625 1128 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 RUNX2Q13950 521 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 ATP6AP1Q15904 470 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 YOD1Q5VVQ6 348 aaPredicted RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 TNFAIP8L2Q6P589 184 aaPredicted RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 ISLR2Q6UXK2 745 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 LINC00696Q6ZRV3 163 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 ZBTB49Q6ZSB9 765 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 ABHD13Q7L211 337 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 EPHX4Q8IUS5 362 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 ZC3H7AQ8IWR0 971 aaKnown RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 CCDC116Q8IYX3 515 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 SHISA5Q8N114 240 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 NATD1Q8N6N6 113 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 AMER2Q8N7J2 671 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 C11orf65Q8NCR3 313 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 NFKBIDQ8NI38 313 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 CENPNQ96H22 339 aaPredicted RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 THOC3Q96J01 351 aaKnown RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 AMDHD1Q96NU7 426 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 SERINC2Q96SA4 455 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 SLC29A1Q99808 456 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 SPATA9Q9BWV2 254 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 VCXQ9H320 206 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 SEMA3GQ9NS98 782 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 SIRT3Q9NTG7 399 aaPredicted RBP9.26□□□□□ -0.93
TPM3-210ENST00000368530 IRAK4Q9NWZ3 460 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 LRCH1Q9Y2L9 728 aa9.26□□□□□ -0.93
TPM3-210ENST00000368530 IGLV3-12A0A075B6K2 115 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 A0A1W2PQ72 361 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 PCDH17O14917 1159 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 CLOCKO15516 846 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 SRPX2O60687 465 aaPredicted RBP9.25□□□□□ -0.93
TPM3-210ENST00000368530 B4GALT2O60909 372 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 TNFRSF21O75509 655 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 JRKO75564 520 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 WISP2O76076 250 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 OPN1SWP03999 348 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 SMIM10L1P0DMW3 83 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 UQCRBP14927 111 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 ALOX12P18054 663 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 GRNP28799 593 aaKnown RBP9.25□□□□□ -0.93
TPM3-210ENST00000368530 KDELR2P33947 212 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 PCGF2P35227 344 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 FRKP42685 505 aaPredicted RBP9.25□□□□□ -0.93
TPM3-210ENST00000368530 CCT3P49368 545 aaKnown RBP9.25□□□□□ -0.93
TPM3-210ENST00000368530 LIM2P55344 173 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 PER3P56645 1201 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 TNFRSF17Q02223 184 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 GUCA2AQ02747 115 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 FOLH1Q04609 750 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 SCARB2Q14108 478 aa9.25□□□□□ -0.93
TPM3-210ENST00000368530 GRM7Q14831 915 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms