RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PNLIPRP1P54315 467 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 SRP54P61011 504 aaKnown RBP12.76□□□□□ -0.37
PRKN-205ENST00000366897 STXBP1P61764 594 aaKnown RBP12.76□□□□□ -0.37
PRKN-205ENST00000366897 EFNB1P98172 346 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 PRAMEF14Q5SWL7 426 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 PIP5KL1Q5T9C9 394 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 PRAMEF13Q5VWM6 474 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 HTR3DQ70Z44 454 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 ZNF767PQ75MW2 155 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 TRILQ7L0X0 811 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 GLRX5Q86SX6 157 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 ARIH2OSQ8N7S6 290 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 ZNF431Q8TF32 576 aaPredicted RBP12.76□□□□□ -0.37
PRKN-205ENST00000366897 PRAP1Q96NZ9 151 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 KCNJ15Q99712 375 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 TMEM175Q9BSA9 504 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 MRPL9Q9BYD2 267 aaKnown RBP12.76□□□□□ -0.37
PRKN-205ENST00000366897 MED28Q9H204 178 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 ZNF624Q9P2J8 865 aaPredicted RBP12.76□□□□□ -0.37
PRKN-205ENST00000366897 NCKAP1Q9Y2A7 1128 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 SYNDIG1LA6NDD5 238 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 I3L521 148 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 UBXN7O94888 489 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 PRKACBP22694 351 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 PKLRP30613 574 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 PXDC1Q5TGL8 231 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 RNLSQ5VYX0 342 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 LRRTM4Q86VH4 590 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 LRRC56Q8IYG6 542 aaPredicted RBP12.76□□□□□ -0.37
PRKN-205ENST00000366897 SAMD12Q8N8I0 201 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 ZNF485Q8NCK3 441 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 OR51G2Q8NGK0 314 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 OR4Q3Q8NH05 313 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 C16orf58Q96GQ5 468 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 ZC3HAV1LQ96H79 300 aaKnown RBP12.76□□□□□ -0.37
PRKN-205ENST00000366897 SLC46A2Q9BY10 475 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.76□□□□□ -0.37
PRKN-205ENST00000366897 DDX31Q9H8H2 851 aaKnown RBP12.76□□□□□ -0.37
PRKN-205ENST00000366897 MED20Q9H944 212 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 PTGFRNQ9P2B2 879 aa12.76□□□□□ -0.37
PRKN-205ENST00000366897 KPNA3O00505 521 aaPredicted RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 GRM6O15303 877 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 TOXO94900 526 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 RB1P06400 928 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 ACADMP11310 421 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 ACP5P13686 325 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 TBXA2RP21731 343 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 SHC1P29353 583 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 FGF9P31371 208 aaPredicted RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 TAS2R41P59536 307 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 C1orf94Q6P1W5 598 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 FAM83HQ6ZRV2 1179 aaPredicted RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 SLC35G5Q96KT7 338 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 FCRL4Q96PJ5 515 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 FGF20Q9NP95 211 aaPredicted RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 ENAMQ9NRM1 1142 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 IMP3Q9NV31 184 aaKnown RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 SLC9A8Q9Y2E8 581 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 MRPS7Q9Y2R9 242 aaKnown RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 FUT1P19526 365 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 BSGP35613 385 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 POU6F2P78424 691 aaPredicted RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 ADAM15Q13444 863 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 FGFBP1Q14512 234 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 MINDY4Q4G0A6 757 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 ZBTB37Q5TC79 503 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 KHDRBS2Q5VWX1 349 aaKnown RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 CD200R1LQ6Q8B3 271 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 LIPIQ6XZB0 460 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 GPR135Q8IZ08 494 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 ZNF655Q8N720 491 aaPredicted RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 SMG7Q92540 1137 aaKnown RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 HYLS1Q96M11 299 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 DPCDQ9BVM2 203 aaPredicted RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 LHX9Q9NQ69 397 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 GLTPQ9NZD2 209 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 P2RX2Q9UBL9 471 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 ICKQ9UPZ9 632 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 COL6A3P12111 3177 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 TCF20Q9UGU0 1960 aaKnown RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 A0A0B4J203 849 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 PIP5K1CO60331 668 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 TIMP1P01033 207 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 HLA-DPB1P04440 258 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 SMIM11AP58511 58 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 FUT5Q11128 374 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 EOGTQ5NDL2 527 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 ADCK2Q7Z695 626 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 SYT9Q86SS6 491 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 METTL3Q86U44 580 aaKnown RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 VRK2Q86Y07 508 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 NKAIN4Q8IVV8 208 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 TDHQ8IZJ6 230 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 CRIPAKQ8N1N5 446 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 SIRT6Q8N6T7 355 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 LRRC20Q8TCA0 184 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 HSD17B8Q92506 261 aa12.75□□□□□ -0.37
PRKN-205ENST00000366897 THAP7Q9BT49 309 aaPredicted RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 TRMT61BQ9BVS5 477 aaKnown RBP12.75□□□□□ -0.37
PRKN-205ENST00000366897 TTTY10Q9BZA0 68 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms