RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 LSM11P83369 360 aaKnown RBP eCLIP12.89□□□□□ -0.35
SGMS1-202ENST00000361781 RGS1Q08116 209 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 ZNF155Q12901 538 aaPredicted RBP12.89□□□□□ -0.35
SGMS1-202ENST00000361781 LRRC37A5PQ49AS3 106 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 SYT14P1Q58G82 188 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 ABI3BPQ7Z7G0 1075 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 LRRTM4Q86VH4 590 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 OOSP2Q86WS3 158 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 FAM109AQ8N4B1 249 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 GNPDA2Q8TDQ7 276 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 SPNS1Q9H2V7 528 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 IGFLR1Q9H665 355 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 ASIC5Q9NY37 505 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 NLGN3Q9NZ94 848 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 DPP7Q9UHL4 492 aa12.89□□□□□ -0.35
SGMS1-202ENST00000361781 WNK3Q9BYP7 1800 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 A0A1B0GW55 424 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 SOCS6O14544 535 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 FZD6O60353 706 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 DUX4L2P0CJ85 424 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 DUX4L3P0CJ86 424 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 DUX4L4P0CJ87 422 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 DUX4L5P0CJ88 424 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 DUX4L6P0CJ89 424 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 DUX4L7P0CJ90 424 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 ACADMP11310 421 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 C6P13671 934 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 BIKQ13323 160 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 DEFB134Q4QY38 66 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 SLC8B1Q6J4K2 584 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 ARMC6Q6NXE6 501 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 PGBD2Q6P3X8 592 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 GAREM2Q75VX8 874 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 TMED4Q7Z7H5 227 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 OR2A12Q8NGT7 310 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 CHTF18Q8WVB6 975 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 OVCA2Q8WZ82 227 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 MCCC1Q96RQ3 725 aaPredicted RBP12.88□□□□□ -0.35
SGMS1-202ENST00000361781 SPHK2Q9NRA0 654 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 PLCXD1Q9NUJ7 323 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 DUX4Q9UBX2 424 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 TRBV5-3A0A0A0MS03 114 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 TRIM64A6NGJ6 449 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 K7ESM1 405 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 OR6A2O95222 327 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 MT-ND5P03915 603 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 ASGR2P07307 311 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 SYPP08247 313 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 HBQ1P09105 142 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 DDCP20711 480 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 CHRNEQ04844 493 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 ILKQ13418 452 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 CDKL4Q5MAI5 379 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 C6orf132Q5T0Z8 1188 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 FAM27D1Q5T7N8 215 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 HES5Q5TA89 166 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 LYPD8Q6UX82 237 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 LIPIQ6XZB0 460 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 SLC9B2Q86UD5 537 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 BOLLQ8N9W6 283 aaKnown RBP12.88□□□□□ -0.35
SGMS1-202ENST00000361781 OR8S1Q8NH09 359 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 RIT1Q92963 219 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 RNF31Q96EP0 1072 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 ALG8Q9BVK2 526 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 SRRQ9GZT4 340 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 SLC28A3Q9HAS3 691 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 C1GALT1Q9NS00 363 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 A3GALT2U3KPV4 340 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 ZAR1LA6NP61 321 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 H2AFB2P0C5Z0 115 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 PEPDP12955 493 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 TIMP2P16035 220 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 DDOSTP39656 456 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 STXBP1P61764 594 aaKnown RBP12.88□□□□□ -0.35
SGMS1-202ENST00000361781 EIF4EBP2Q13542 120 aaPredicted RBP12.88□□□□□ -0.35
SGMS1-202ENST00000361781 TP53I3Q53FA7 332 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 ESPNLQ6ZVH7 1005 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 NUDT18Q6ZVK8 323 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 FAM220AQ7Z4H9 259 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 ZER1Q7Z7L7 766 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 COMMD7Q86VX2 200 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 FANK1Q8TC84 345 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 KATNB1Q9BVA0 655 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 CERS4Q9HA82 394 aa12.88□□□□□ -0.35
SGMS1-202ENST00000361781 RP1L1Q8IWN7 2480 aaPredicted RBP12.87□□□□□ -0.35
SGMS1-202ENST00000361781 H3BQ06 376 aaPredicted RBP12.87□□□□□ -0.35
SGMS1-202ENST00000361781 RFXAPO00287 272 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 FLRT2O43155 660 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 TGM5O43548 720 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 EFCAB14O75071 495 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 IL1RNP18510 177 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 NDUFV2P19404 249 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 F8A1P23610 371 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 ACVR2AP27037 513 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 ADH7P40394 386 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 CCR6P51684 374 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 PXDC1Q5TGL8 231 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 SIMC1Q8NDZ2 872 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 OR9A2Q8NGT5 310 aa12.87□□□□□ -0.35
SGMS1-202ENST00000361781 ZNF514Q96K75 400 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms