RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 EPHX1P07099 455 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 CPEP16870 476 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 PSMA6P60900 246 aaKnown RBP11.97□□□□□ -0.49
VAMP1-201ENST00000361716 UBE2MP61081 183 aaKnown RBP11.97□□□□□ -0.49
VAMP1-201ENST00000361716 SREBF2Q12772 1141 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 SWI5Q1ZZU3 235 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 FAM209BQ5JX69 171 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 MORN1Q5T089 497 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 AGTRAPQ6RW13 159 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 SMARCD3Q6STE5 483 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 LINGO2Q7L985 606 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 OR51G2Q8NGK0 314 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 SPRYD4Q8WW59 207 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-201ENST00000361716 SORCS1Q8WY21 1168 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 CLP1Q92989 425 aaKnown RBP11.97□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF582Q96NG8 517 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-201ENST00000361716 WRAP53Q9BUR4 548 aaKnown RBP11.97□□□□□ -0.49
VAMP1-201ENST00000361716 MVB12BQ9H7P6 319 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 EQTNQ9NQ60 294 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 THSD1Q9NS62 852 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 TAS2R3Q9NYW6 316 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 SCP2D1Q9UJQ7 156 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 MRTO4Q9UKD2 239 aaKnown RBP11.97□□□□□ -0.49
VAMP1-201ENST00000361716 PRELID3BQ9Y3B1 194 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 OR10H1Q9Y4A9 318 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF840PA6NDX5 716 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 OR6C75A6NL08 312 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 PRSS44E7EML9 344 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 SCAMP2O15127 329 aaKnown RBP11.97□□□□□ -0.49
VAMP1-201ENST00000361716 CA12O43570 354 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF623O75123 536 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 ERAL1O75616 437 aaKnown RBP11.97□□□□□ -0.49
VAMP1-201ENST00000361716 OAZ2O95190 189 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 SLC16A8O95907 504 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 IGHA2P01877 340 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 AOAHP28039 575 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 ACVR1BP36896 505 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 MANFP55145 182 aaKnown RBP11.97□□□□□ -0.49
VAMP1-201ENST00000361716 CDH11P55287 796 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 FAM74A1Q5RGS3 127 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 C18orf63Q68DL7 685 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 SERPINA12Q8IW75 414 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 CFAP206Q8IYR0 622 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 OR2T4Q8NH00 348 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 NANPQ8TBE9 248 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 WDR89Q96FK6 387 aaPredicted RBP11.97□□□□□ -0.49
VAMP1-201ENST00000361716 OSGEPL1Q9H4B0 414 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 SLC13A4Q9UKG4 626 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 CORO2BQ9UQ03 480 aa11.97□□□□□ -0.49
VAMP1-201ENST00000361716 TO15178 435 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 C4BPBP20851 252 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 XCR1P46094 333 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 WDR5P61964 334 aaKnown RBP11.96□□□□□ -0.49
VAMP1-201ENST00000361716 SP3Q02447 781 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 CNTN1Q12860 1018 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF385BQ569K4 471 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 DGLUCYQ7Z3D6 616 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 DDX53Q86TM3 631 aaKnown RBP11.96□□□□□ -0.49
VAMP1-201ENST00000361716 METTL3Q86U44 580 aaKnown RBP11.96□□□□□ -0.49
VAMP1-201ENST00000361716 FAM181AQ8N9Y4 354 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 TRMT10AQ8TBZ6 339 aaKnown RBP11.96□□□□□ -0.49
VAMP1-201ENST00000361716 ZC3HAV1LQ96H79 300 aaKnown RBP11.96□□□□□ -0.49
VAMP1-201ENST00000361716 IL17FQ96PD4 163 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 GHITMQ9H3K2 345 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 SLC25A19Q9HC21 320 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 TMEM138Q9NPI0 162 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 LYARQ9NX58 379 aaKnown RBP11.96□□□□□ -0.49
VAMP1-201ENST00000361716 KCMF1Q9P0J7 381 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF282Q9UDV7 671 aaPredicted RBP11.96□□□□□ -0.49
VAMP1-201ENST00000361716 PHF11Q9UIL8 331 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 GPR160Q9UJ42 338 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 ARPC1BO15143 372 aaKnown RBP11.96□□□□□ -0.49
VAMP1-201ENST00000361716 SLC28A2O43868 658 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 PRAMEF4O60810 478 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 RLN1P04808 185 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 OR12D1P0DN82 309 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 CR2P20023 1033 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 PPIBP23284 216 aaKnown RBP11.96□□□□□ -0.49
VAMP1-201ENST00000361716 VEGFBP49765 207 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 SLBPQ14493 270 aaKnown RBP eCLIP11.96□□□□□ -0.49
VAMP1-201ENST00000361716 ANXA8L1Q5VT79 327 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 PRAMEF9Q5VWM5 478 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 TMEM107Q6UX40 140 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 LRRN1Q6UXK5 716 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 QSOX2Q6ZRP7 698 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 PAQR7Q86WK9 346 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF784Q8NCA9 323 aaPredicted RBP11.96□□□□□ -0.49
VAMP1-201ENST00000361716 ZNF740Q8NDX6 193 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 TEX47Q8TBZ9 253 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 DOK4Q8TEW6 326 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 SLC38A2Q96QD8 506 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 OR2M2Q96R28 347 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 CNIH4Q9P003 139 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 B4GALT6Q9UBX8 382 aa11.96□□□□□ -0.49
VAMP1-201ENST00000361716 A0A1W2PRB8 838 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 RAB19A4D1S5 217 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 KRBOX1C9JBD0 128 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 SGCEO43556 437 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 SCN2BO60939 215 aa11.96□□□□□ -0.5
VAMP1-201ENST00000361716 NTN1O95631 604 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms