RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 TLR4O00206 839 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 SCG5P05408 212 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 LSM11P83369 360 aaKnown RBP eCLIP21.17■□□□□ 0.982e-7■■■■□ 20.1
LDB1-201ENST00000361198 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.17■□□□□ 0.98
LDB1-201ENST00000361198 KRR1Q13601 381 aaKnown RBP21.17■□□□□ 0.98
LDB1-201ENST00000361198 PRAMEF8Q5VWM4 474 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 PRAMEF7Q5VXH5 474 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 MEDAGQ5VYS4 303 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 CAMKVQ8NCB2 501 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 SIMC1Q8NDZ2 872 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 ZFPM2Q8WW38 1151 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 EFHD2Q96C19 240 aaPredicted RBP21.17■□□□□ 0.98
LDB1-201ENST00000361198 PINK1Q9BXM7 581 aa21.17■□□□□ 0.98
LDB1-201ENST00000361198 POLR2J3Q9H1A7 115 aaKnown RBP21.17■□□□□ 0.98
LDB1-201ENST00000361198 LSM2Q9Y333 95 aaKnown RBP21.17■□□□□ 0.98
LDB1-201ENST00000361198 URADA6NGE7 173 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 ZNF860A6NHJ4 632 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 H0YGG7 62 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 CASC3O15234 703 aaKnown RBP21.16■□□□□ 0.98
LDB1-201ENST00000361198 ASNA1O43681 348 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 B3GALT2O43825 422 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 ENTPD6O75354 484 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 EIF2S1P05198 315 aaKnown RBP21.16■□□□□ 0.98
LDB1-201ENST00000361198 ARF3P61204 181 aaPredicted RBP21.16■□□□□ 0.98
LDB1-201ENST00000361198 UBE2IP63279 158 aaKnown RBP21.16■□□□□ 0.98
LDB1-201ENST00000361198 KIAA0895LQ68EN5 471 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 TMEFF1Q8IYR6 380 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 OR4K14Q8NGD5 310 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 SLC37A2Q8TED4 501 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 OPALINQ96PE5 141 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 ACTRT3Q9BYD9 372 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 GSDMCQ9BYG8 508 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 HRASLS2Q9NWW9 162 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 C2orf74A8MZ97 194 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 H3BN98 237 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 GPX5O75715 221 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 ENDOUP21128 410 aaKnown RBP21.16■□□□□ 0.98
LDB1-201ENST00000361198 TPTEP56180 551 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 ZNF311Q5JNZ3 666 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 SPANXN2Q5MJ10 180 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 C12orf73Q69YU5 71 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 PRSS41Q7RTY9 318 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 ZNF761Q86XN6 746 aaPredicted RBP21.16■□□□□ 0.98
LDB1-201ENST00000361198 VRK2Q86Y07 508 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 SLC16A11Q8NCK7 471 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 SLC35A4Q96G79 324 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 IL4I1Q96RQ9 567 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 PRR14Q9BWN1 585 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 HHATLQ9HCP6 504 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 SLCO1B1Q9Y6L6 691 aa21.16■□□□□ 0.98
LDB1-201ENST00000361198 SPTY2D1-AS1A0A0U1RR47 76 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 ZIC2O95409 532 aaPredicted RBP21.15■□□□□ 0.98
LDB1-201ENST00000361198 GLULP15104 373 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 CSTF2P33240 577 aaKnown RBP eCLIP21.15■□□□□ 0.98
LDB1-201ENST00000361198 NCF4Q15080 339 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 BAHD1Q8TBE0 780 aaPredicted RBP21.15■□□□□ 0.98
LDB1-201ENST00000361198 PRRC1Q96M27 445 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 NUAK2Q9H093 628 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 RACGAP1Q9H0H5 632 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 POLMQ9NP87 494 aaPredicted RBP21.15■□□□□ 0.98
LDB1-201ENST00000361198 C2orf42Q9NWW7 574 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 LIPT1Q9Y234 373 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 SLC22A7Q9Y694 548 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 LOC110117498-PIK3R3F6TDL0 507 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 FCMRO60667 390 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 DLGAP3O95886 979 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 IGLV3-19P01714 112 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 TP53P04637 393 aaPredicted RBP21.15■□□□□ 0.98
LDB1-201ENST00000361198 THEGLP0DJG4 465 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 SPNP16150 400 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 ALOX12P18054 663 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 PPP1CAP62136 330 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 GDPGP1Q6ZNW5 385 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 ABHD13Q7L211 337 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 C16orf62Q7Z3J2 963 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 ZER1Q7Z7L7 766 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 OR4K5Q8NGD3 323 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 ADAMTS15Q8TE58 950 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 CHAC2Q8WUX2 184 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 PIK3R3Q92569 461 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 RERGQ96A58 199 aaPredicted RBP21.15■□□□□ 0.98
LDB1-201ENST00000361198 GPR174Q9BXC1 333 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 GPR55Q9Y2T6 319 aaPredicted RBP21.15■□□□□ 0.98
LDB1-201ENST00000361198 CHST2Q9Y4C5 530 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 ENTPD2Q9Y5L3 495 aa21.15■□□□□ 0.98
LDB1-201ENST00000361198 HTR3EA5X5Y0 456 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 SNPHO15079 494 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 FRS3O43559 492 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 MMP11P24347 488 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 SOX18P35713 384 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 CCR5P51681 352 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 C1orf61Q13536 156 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 FZD2Q14332 565 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 KCNJ8Q15842 424 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 RNLSQ5VYX0 342 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 MFSD12Q6NUT3 480 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 TAF8Q7Z7C8 310 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 MORN4Q8NDC4 146 aa21.14■□□□□ 0.97
LDB1-201ENST00000361198 SDHCQ99643 169 aaPredicted RBP21.14■□□□□ 0.97
LDB1-201ENST00000361198 NTMQ9P121 344 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms