RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ELNP15502 786 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 KCNC1P48547 511 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 VSX2P58304 361 aaPredicted RBP13.22□□□□□ -0.29
SMC5-201ENST00000361138 SLC9B2Q86UD5 537 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 ZNF280BQ86YH2 543 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 PINK1Q9BXM7 581 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 IGFLR1Q9H665 355 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 B3GNT2Q9NY97 397 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 DHDHQ9UQ10 334 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 A6NIN4 97 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 MUSKO15146 869 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 CDC40O60508 579 aaKnown RBP eCLIP13.22□□□□□ -0.29
SMC5-201ENST00000361138 STC2O76061 302 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 ACPPP15309 386 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 ENDOUP21128 410 aaKnown RBP13.22□□□□□ -0.29
SMC5-201ENST00000361138 MMP12P39900 470 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 KRBOX4Q5JUW0 171 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 CRTC1Q6UUV9 634 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 VITQ6UXI7 678 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 OR52E2Q8NGJ4 325 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 KLK6Q92876 244 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 CPNE2Q96FN4 548 aaPredicted RBP13.22□□□□□ -0.29
SMC5-201ENST00000361138 BIN3Q9NQY0 253 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 TRPM3Q9HCF6 1732 aaPredicted RBP13.22□□□□□ -0.29
SMC5-201ENST00000361138 RTCAO00442 366 aaKnown RBP13.22□□□□□ -0.29
SMC5-201ENST00000361138 RNF13O43567 381 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 SLC22A5O76082 557 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 STK19P49842 368 aaPredicted RBP13.22□□□□□ -0.29
SMC5-201ENST00000361138 GAS6Q14393 721 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 DNM1P34Q6PK57 102 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 BEST4Q8NFU0 473 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 OR4K14Q8NGD5 310 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 CD99L2Q8TCZ2 262 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 ARL11Q969Q4 196 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 GAL3ST3Q96A11 431 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 EIF5A2Q9GZV4 153 aaKnown RBP13.22□□□□□ -0.29
SMC5-201ENST00000361138 NOX3Q9HBY0 568 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 GALNT9Q9HCQ5 603 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 IL26Q9NPH9 171 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 DMRT3Q9NQL9 472 aa13.22□□□□□ -0.29
SMC5-201ENST00000361138 TRBV4-1A0A0J9YWV2 114 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 HOXC11O43248 304 aaPredicted RBP13.21□□□□□ -0.29
SMC5-201ENST00000361138 CATSPEREQ5SY80 951 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 OR2G6Q5TZ20 316 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 PODNL1Q6PEZ8 512 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 IL20RBQ6UXL0 311 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 LRRTM3Q86VH5 581 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 TMEM185AQ8NFB2 350 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 SMPDL3BQ92485 455 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 EGLN2Q96KS0 407 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 ORAI3Q9BRQ5 295 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 ACTL8Q9H568 366 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 Q9N2J8 555 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 AK6Q9Y3D8 172 aaKnown RBP13.21□□□□□ -0.29
SMC5-201ENST00000361138 CSNK1G3Q9Y6M4 447 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 DOCK2Q92608 1830 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 SCDO00767 359 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 ZNF780AO75290 641 aaPredicted RBP13.21□□□□□ -0.29
SMC5-201ENST00000361138 KCNK5O95279 499 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 CBLP22681 906 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 XKR7Q5GH72 579 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 ZNF550Q7Z398 422 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 SLC35F2Q8IXU6 374 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 RBPMSQ93062 196 aaKnown RBP13.21□□□□□ -0.29
SMC5-201ENST00000361138 RELTQ969Z4 430 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 PRRC1Q96M27 445 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 MFFQ9GZY8 342 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 DDX31Q9H8H2 851 aaKnown RBP13.21□□□□□ -0.29
SMC5-201ENST00000361138 OR2S2Q9NQN1 319 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 TEX13DA0A0J9YY54 714 aaPredicted RBP13.21□□□□□ -0.29
SMC5-201ENST00000361138 EEF1E1-BLOC1S5C9J1V9 151 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 ATP6V1G2-DDX39BF2Z307 99 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 LEFTY1O75610 366 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 SLC10A3P09131 477 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 ATP5A1P25705 553 aaKnown RBP13.21□□□□□ -0.29
SMC5-201ENST00000361138 HLA-DMAP28067 261 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 RAB11BQ15907 218 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 MAPK14Q16539 360 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 TMEM207Q6UWW9 146 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 GSG1LQ6UXU4 331 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 OR7G3Q8NG95 312 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 TMEM40Q8WWA1 233 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 RNF167Q9H6Y7 350 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 SLC7A7Q9UM01 511 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 NAALAD2Q9Y3Q0 740 aa13.21□□□□□ -0.29
SMC5-201ENST00000361138 ARL14Q8N4G2 192 aa13.21□□□□□ -0.3
SMC5-201ENST00000361138 NT5C3BQ969T7 300 aa13.21□□□□□ -0.3
SMC5-201ENST00000361138 METTL17Q9H7H0 456 aaPredicted RBP13.21□□□□□ -0.3
SMC5-201ENST00000361138 MYNNQ9NPC7 610 aa13.21□□□□□ -0.3
SMC5-201ENST00000361138 KRBOX1C9JBD0 128 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 C1QBP02746 253 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 PIM1P11309 404 aaPredicted RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 TGFBR1P36897 503 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 AAK1Q2M2I8 961 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 ITPRIPL2Q3MIP1 535 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 LEXMQ3ZCV2 418 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 MINDY4Q4G0A6 757 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 UBE2NLQ5JXB2 153 aa13.2□□□□□ -0.3
SMC5-201ENST00000361138 MEX3DQ86XN8 651 aaKnown RBP13.2□□□□□ -0.3
SMC5-201ENST00000361138 SYNPRQ8TBG9 265 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms