RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 KIAA1210Q9ULL0 1709 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 POM121CA8CG34 1229 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 MYF6P23409 242 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 BDH1Q02338 343 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 C14orf28Q4W4Y0 310 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 SLC22A10Q63ZE4 541 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 SLC5A8Q8N695 610 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 SAMD10Q9BYL1 202 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 FTSJ1Q9UET6 329 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 RPH3ALQ9UNE2 315 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 INSL5Q9Y5Q6 135 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 C1orf226A1L170 272 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 ARPC1BO15143 372 aaKnown RBP15.23■□□□□ 0.03
COL18A1-203ENST00000359759 RFPL3O75679 317 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 HS6ST2Q96MM7 605 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 SYT3Q9BQG1 590 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 HIF1ANQ9NWT6 349 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 CNIH4Q9P003 139 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 VSTM2BA6NLU5 285 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 UPK1BO75841 260 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 ETV4P43268 484 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 ACTBP60709 375 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 ACTG1P63261 375 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 ARHGAP1Q07960 439 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 ZNF805Q5CZA5 627 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 CCDC71LQ8N9Z2 235 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 SUMF2Q8NBJ7 301 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 OR52B6Q8NGF0 335 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 TSPAN10Q9H1Z9 355 aaPredicted RBP15.23■□□□□ 0.03
COL18A1-203ENST00000359759 MARCH4Q9P2E8 410 aaPredicted RBP15.23■□□□□ 0.03
COL18A1-203ENST00000359759 DOC2AQ14183 400 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 CSNK1A1LQ8N752 337 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 DDIT4LQ96D03 193 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 TMEM19Q96HH6 336 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 A6NCN8 305 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 GLTPD2A6NH11 291 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 A8MXE2 369 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 AIPO00170 330 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 KIAA0355O15063 1070 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 LATO43561 262 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 HPGDSO60760 199 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 PRSS56P0CW18 603 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 HAPLN1P10915 354 aaPredicted RBP15.23■□□□□ 0.03
COL18A1-203ENST00000359759 TAS2R20P59543 309 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 RRAS2P62070 204 aaPredicted RBP15.23■□□□□ 0.03
COL18A1-203ENST00000359759 LMAN2Q12907 356 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 DPY19L2P1Q6NXN4 242 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 ZMYND19Q96E35 227 aaPredicted RBP15.23■□□□□ 0.03
COL18A1-203ENST00000359759 DPH7Q9BTV6 452 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 ABRACLQ9P1F3 81 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 B3GNT3Q9Y2A9 372 aa15.23■□□□□ 0.03
COL18A1-203ENST00000359759 MPIG6BO95866 241 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 JUPP14923 745 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 PSMB10P40306 273 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 GBX1Q14549 363 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 AARDQ4LEZ3 155 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 BORAQ6PGQ7 559 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 CDHR3Q6ZTQ4 885 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 ZNF761Q86XN6 746 aaPredicted RBP15.22■□□□□ 0.03
COL18A1-203ENST00000359759 SLC2A12Q8TD20 617 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 OR2M4Q96R27 311 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 TMEM175Q9BSA9 504 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 ALG8Q9BVK2 526 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 MTMR11A4FU01 709 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 SHC2P98077 582 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 SCAPQ12770 1279 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 NXPE4Q6UWF7 544 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 TECPR1Q7Z6L1 1165 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 OR52N2Q8NGI0 321 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 APMAPQ9HDC9 416 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 PLEKHJ1Q9NW61 149 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 KCMF1Q9P0J7 381 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 PCYT1BQ9Y5K3 369 aaPredicted RBP15.22■□□□□ 0.03
COL18A1-203ENST00000359759 TGM6O95932 706 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 TM4SF1P30408 202 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 MGAT3Q09327 533 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 BLOC1S3Q6QNY0 202 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 NOXA1Q86UR1 476 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 CYB561A3Q8NBI2 242 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 GLYATL1Q969I3 302 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 TLR9Q9NR96 1032 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 TAS2R8Q9NYW2 309 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 DENRO43583 198 aaKnown RBP15.22■□□□□ 0.03
COL18A1-203ENST00000359759 CA5AP35218 305 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 ELOCQ15369 112 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 MRPL41Q8IXM3 137 aaKnown RBP15.22■□□□□ 0.03
COL18A1-203ENST00000359759 BEST4Q8NFU0 473 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 ST7LQ8TDW4 575 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 HRH4Q9H3N8 390 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 NMNAT1Q9HAN9 279 aaPredicted RBP15.22■□□□□ 0.03
COL18A1-203ENST00000359759 SLC2A4RGQ9NR83 387 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 NUDT21O43809 227 aaKnown RBP15.22■□□□□ 0.03
COL18A1-203ENST00000359759 PEX14O75381 377 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 CLN5O75503 358 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 SERPINA5P05154 406 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 SLC35E2BP0CK96 405 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 SIM1P81133 766 aaPredicted RBP15.22■□□□□ 0.03
COL18A1-203ENST00000359759 FOXN4Q96NZ1 517 aa15.22■□□□□ 0.03
COL18A1-203ENST00000359759 MPC1LP0DKB6 136 aa15.21■□□□□ 0.03
COL18A1-203ENST00000359759 TAS2R38P59533 333 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms