RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 CDKN3Q16667 212 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PRSS53Q2L4Q9 553 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 Q5BKY6 102 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 FAM209AQ5JX71 171 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PRPF38BQ5VTL8 546 aaKnown RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 RNF44Q7L0R7 432 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 MEIOBQ8N635 442 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 SUSD6Q92537 303 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 RIPOR3Q96MK2 946 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 GON7Q9BXV9 100 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 GSDMCQ9BYG8 508 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 KRCC1Q9NPI7 259 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 SPHK2Q9NRA0 654 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 DIMT1Q9UNQ2 313 aaKnown RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 IQCMA0A1B0GVH7 501 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 FAM86C2PA6NEL3 165 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PSMD9O00233 223 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 RGS13O14921 159 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PROM1O43490 865 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 GMFGO60234 142 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 STX11O75558 287 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 RLN1P04808 185 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 GKN3PP0CG01 181 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 ACADMP11310 421 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 C6P13671 934 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 ELK1P19419 428 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 MC3RP41968 323 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PRLHRP49683 370 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 GZMKP49863 264 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 P2RX3P56373 397 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 SNRPGP62308 76 aaKnown RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 CHRNEQ04844 493 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 DOC2BQ14184 412 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 NDUFA9Q16795 377 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 ODF4Q2M2E3 257 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 SMUG1Q53HV7 270 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 FAM26DQ5JW98 314 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 CCNJQ5T5M9 372 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 MLIPQ5VWP3 458 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 ESPNLQ6ZVH7 1005 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 SERPINA12Q8IW75 414 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 CLDN22Q8N7P3 220 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 TMEM163Q8TC26 289 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 GNPDA2Q8TDQ7 276 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 OR8D1Q8WZ84 308 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 TM4SF18Q96CE8 201 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 DNAJA3Q96EY1 480 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PDXPQ96GD0 296 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 NARS2Q96I59 477 aaKnown RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 MAP6Q96JE9 813 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 HYLS1Q96M11 299 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 NXF2Q9GZY0 626 aaKnown RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 TMEM138Q9NPI0 162 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 SLC35C2Q9NQQ7 365 aa6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PLEKHB1Q9UF11 243 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-203ENST00000358528 PTPRDP23468 1912 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 SCN2AQ99250 2005 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 F5P12259 2224 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 LOC285556D6RIA3 1793 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 A0A087WUU8 490 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 A0A0B4J203 849 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 ABHD14A-ACY1A0A1B0GW23 586 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 H0YC42 278 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 ERVH48-1M5A8F1 160 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 TMPRSS11DO60235 418 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 PIP5K1CO60331 668 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 MT-ND4P03905 459 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 HRGP04196 525 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 FUT1P19526 365 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 CSNK2A2P19784 350 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-203ENST00000358528 TRIM23P36406 574 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 NAA10P41227 235 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-203ENST00000358528 MLLT3P42568 568 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-203ENST00000358528 CCR6P51684 374 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 MVDP53602 400 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 BTN3A2P78410 334 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 RAB40BQ12829 278 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 HYAL4Q2M3T9 481 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 PLCZ1Q86YW0 608 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 ACBD7Q8N6N7 88 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 AMER3Q8N944 861 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 NUP43Q8NFH3 380 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 OR10G6Q8NH81 332 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 CEP76Q8TAP6 659 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 TRMT10AQ8TBZ6 339 aaKnown RBP6.18□□□□□ -1.42
CSDE1-203ENST00000358528 ADAMTS19Q8TE59 1207 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 POLDIP3Q9BY77 421 aaKnown RBP6.18□□□□□ -1.42
CSDE1-203ENST00000358528 SLC23A1Q9UHI7 598 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 HS3ST2Q9Y278 367 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 OR1A2Q9Y585 309 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 BRCA2P51587 3418 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 MN1Q10571 1320 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-203ENST00000358528 SLC5A10A0PJK1 596 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 LRRC72A6NJI9 287 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 MAGEB4O15481 346 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-203ENST00000358528 UBXN7O94888 489 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 ADH1AP07327 375 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 ANXA3P12429 323 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 GRPRP30550 384 aa6.18□□□□□ -1.42
CSDE1-203ENST00000358528 GABRA5P31644 462 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms