RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 AKAP1Q92667 903 aaKnown RBP eCLIP16.62■□□□□ 0.25
RTN4-204ENST00000357732 UPRTQ96BW1 309 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 OTUB1Q96FW1 271 aaPredicted RBP16.62■□□□□ 0.25
RTN4-204ENST00000357732 COX14Q96I36 57 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 ZNF649Q9BS31 505 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 BEX2Q9BXY8 128 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 B3GAT2Q9NPZ5 323 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 SSR2P43308 183 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 ATP12AP54707 1039 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 PRR5P85299 388 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 P2RY14Q15391 338 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 CCDC58Q4VC31 144 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 ZNF697Q5TEC3 545 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 ADAMTSL4Q6UY14 1074 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 NLKQ9UBE8 527 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 TBX21Q9UL17 535 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 SLC27A6Q9Y2P4 619 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 GPR52Q9Y2T5 361 aa16.62■□□□□ 0.25
RTN4-204ENST00000357732 PRRC2BQ5JSZ5 2229 aaKnown RBP16.62■□□□□ 0.25
RTN4-204ENST00000357732 OR1F1O43749 312 aa16.61■□□□□ 0.25
RTN4-204ENST00000357732 CPNE3O75131 537 aaKnown RBP16.61■□□□□ 0.25
RTN4-204ENST00000357732 CHRM5P08912 532 aaPredicted RBP16.61■□□□□ 0.25
RTN4-204ENST00000357732 CISD3P0C7P0 127 aa16.61■□□□□ 0.25
RTN4-204ENST00000357732 HK1P19367 917 aa16.61■□□□□ 0.25
RTN4-204ENST00000357732 METRNLQ641Q3 311 aa16.61■□□□□ 0.25
RTN4-204ENST00000357732 PAMR1Q6UXH9 720 aa16.61■□□□□ 0.25
RTN4-204ENST00000357732 LRRC28Q86X40 367 aaPredicted RBP16.61■□□□□ 0.25
RTN4-204ENST00000357732 ZNF296Q8WUU4 475 aaPredicted RBP16.61■□□□□ 0.25
RTN4-204ENST00000357732 DEDD2Q8WXF8 326 aa16.61■□□□□ 0.25
RTN4-204ENST00000357732 OR8D1Q8WZ84 308 aa16.61■□□□□ 0.25
RTN4-204ENST00000357732 KRCC1Q9NPI7 259 aaPredicted RBP16.61■□□□□ 0.25
RTN4-204ENST00000357732 KLHL28Q9NXS3 571 aa16.61■□□□□ 0.25
RTN4-204ENST00000357732 KLF15Q9UIH9 416 aa16.61■□□□□ 0.25
RTN4-204ENST00000357732 COL4A3Q01955 1670 aa16.61■□□□□ 0.25
RTN4-204ENST00000357732 A0A1W2PPV9 198 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 GSAPA4D1B5 854 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 H7BY64 318 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 OR2B3O76000 313 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 ACP5P13686 325 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 ADRB3P13945 408 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 CELP19835 753 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 PRKAR1BP31321 381 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 HTR2BP41595 481 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 MRPL28Q13084 256 aaKnown RBP16.6■□□□□ 0.25
RTN4-204ENST00000357732 SLC9A5Q14940 896 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 DEFB115Q30KQ5 88 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 ZNF311Q5JNZ3 666 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 LHFPL3Q86UP9 236 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 LRRTM4Q86VH4 590 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 GID4Q8IVV7 300 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 C2orf73Q8N5S3 287 aaPredicted RBP16.6■□□□□ 0.25
RTN4-204ENST00000357732 PRAP1Q96NZ9 151 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 IRF2BPLQ9H1B7 796 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 FEZF1A0PJY2 475 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 LRIT2A6NDA9 550 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 PRR23AA6NEV1 266 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 INMT-MINDY4F8WBC2 141 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 RGS9O75916 674 aaPredicted RBP16.6■□□□□ 0.25
RTN4-204ENST00000357732 APOL3O95236 402 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 LALBAP00709 142 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 HMGN2P05204 90 aaKnown RBP16.6■□□□□ 0.25
RTN4-204ENST00000357732 PKLRP30613 574 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 CAV3P56539 151 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 CSNK1G2P78368 415 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 SHC2P98077 582 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 TRAM1Q15629 374 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 PGGHGQ32M88 737 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 EOGTQ5NDL2 527 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 ZNF322Q6U7Q0 402 aaPredicted RBP16.6■□□□□ 0.25
RTN4-204ENST00000357732 ZNF782Q6ZMW2 699 aaPredicted RBP16.6■□□□□ 0.25
RTN4-204ENST00000357732 UBE2J2Q8N2K1 259 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 ARRDC3Q96B67 414 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 TMED9Q9BVK6 235 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 TMEM39AQ9NV64 488 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 NLGN3Q9NZ94 848 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 PTTG3PQ9NZH4 202 aa16.6■□□□□ 0.25
RTN4-204ENST00000357732 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.59■□□□□ 0.25
RTN4-204ENST00000357732 ERVH48-1M5A8F1 160 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 KLF4O43474 513 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 SLC6A1P30531 599 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 NUDT1P36639 197 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 TSFMP43897 325 aaKnown RBP16.59■□□□□ 0.25
RTN4-204ENST00000357732 P2RX3P56373 397 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 LSM11P83369 360 aaKnown RBP eCLIP16.59■□□□□ 0.25
RTN4-204ENST00000357732 HBMQ6B0K9 141 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 KIAA1161Q6NSJ0 714 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 CADM2Q8N3J6 435 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 TP53I13Q8NBR0 393 aaPredicted RBP16.59■□□□□ 0.25
RTN4-204ENST00000357732 OR5M3Q8NGP4 307 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 TOX2Q96NM4 488 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 HDHD5Q9BXW7 423 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 RNF32Q9H0A6 362 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 TBC1D17Q9HA65 648 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 CYSLTR2Q9NS75 346 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 EDDM13A0A1B0GTR0 161 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 ISM1B1AKI9 464 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 EMC8O43402 210 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 OR5F1O95221 314 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 NFATC1O95644 943 aa16.59■□□□□ 0.25
RTN4-204ENST00000357732 RBMS1P29558 406 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms